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Job request: 12434

Organisation:
Bennett Institute
Workspace:
mab-av-non-user-main
ID:
23gxveub45ufcpyy
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Linda Nab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    cox_day5_age_sex_organ_ba2
    Status:
    Succeeded
    Job identifier:
    pkx67jhb7gtk4efi
  • Action:
    cox_day5_crude
    Status:
    Succeeded
    Job identifier:
    7p73thnhklwyntz5
  • Action:
    cox_day5_age_sex
    Status:
    Succeeded
    Job identifier:
    q4kbgtsfq73rrtsv
  • Action:
    cox_day5_age_sex_haem_malig_ba2
    Status:
    Succeeded
    Job identifier:
    xfuchywbg4qaaxg6
  • Action:
    cox_day5_crude_haem_malig_ba2
    Status:
    Succeeded
    Job identifier:
    6nnudoipwmy5mh42
  • Action:
    cox_day5_full_haem_malig_ba2
    Status:
    Succeeded
    Job identifier:
    ppk4poomte2pmgpv
  • Action:
    cox_day5_crude_haem_malig
    Status:
    Succeeded
    Job identifier:
    ncrkhjtchih2lsa2
  • Action:
    cox_day5_age_sex_organ
    Status:
    Succeeded
    Job identifier:
    66dxlehivpk7th7l
  • Action:
    crosstab_trt_outcomes
    Status:
    Succeeded
    Job identifier:
    ppbjzy4or44mxtqk
  • Action:
    cox_day5_full
    Status:
    Succeeded
    Job identifier:
    igkumidrk44hlgaa
  • Action:
    cox_day5_crude_organ
    Status:
    Succeeded
    Job identifier:
    xiqsgyiehen56swi
  • Action:
    cox_day5_age_sex_ba2
    Status:
    Succeeded
    Job identifier:
    jws7ze6b4fyfhqvg
  • Action:
    cox_day5_full_organ
    Status:
    Failed
    Job identifier:
    nnyn6bes6wotbzgd
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/figs/*_full_cumInc_day5_organ_new.png
  • Action:
    cox_day5_full_ba2
    Status:
    Succeeded
    Job identifier:
    utqv4bsdktlfpe6b
  • Action:
    cox_day5_age_sex_haem_malig
    Status:
    Succeeded
    Job identifier:
    hyjxjlr2ffiew4ud
  • Action:
    cox_day5_crude_organ_ba2
    Status:
    Succeeded
    Job identifier:
    uo5tj37ke3c3yqu3
  • Action:
    cox_day5_crude_ba2
    Status:
    Succeeded
    Job identifier:
    w5culnnskz7zgggj
  • Action:
    cox_day5_full_haem_malig
    Status:
    Succeeded
    Job identifier:
    fcpelrbismyn6k7a
  • Action:
    cox_day5_full_organ_ba2
    Status:
    Failed
    Job identifier:
    4oztme5cqcs5dopo
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/figs/*_full_cumInc_day5_ba2_organ_new.png
  • Action:
    crosstab_trt_outcomes_ba2
    Status:
    Succeeded
    Job identifier:
    af75pt6qa656un3s
  • Action:
    table_S2
    Status:
    Succeeded
    Job identifier:
    luvokmpy6ezgzlfq
  • Action:
    table_3
    Status:
    Succeeded
    Job identifier:
    mfbc6kdttnnid6c6

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 01:19:31

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
mab-av-non-user-main
Requested by
Linda Nab
Branch
main
Force run dependencies
No
Git commit hash
9d75cf4
Requested actions
  • crosstab_trt_outcomes
  • crosstab_trt_outcomes_ba2
  • cox_day5_full
  • cox_day5_full_ba2
  • cox_day5_age_sex
  • cox_day5_age_sex_ba2
  • cox_day5_crude
  • cox_day5_crude_ba2
  • cox_day5_full_organ
  • cox_day5_age_sex_organ
  • cox_day5_crude_organ
  • cox_day5_full_organ_ba2
  • cox_day5_age_sex_organ_ba2
  • cox_day5_crude_organ_ba2
  • cox_day5_full_haem_malig
  • cox_day5_age_sex_haem_malig
  • cox_day5_crude_haem_malig
  • cox_day5_full_haem_malig_ba2
  • cox_day5_age_sex_haem_malig_ba2
  • cox_day5_crude_haem_malig_ba2
  • table_3
  • table_S2

Code comparison

Compare the code used in this job request