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Job request: 16339

Organisation:
Bennett Institute
Workspace:
mabsavs-usernonuser-ccw
ID:
imwrg7kuv7tw2ffq

This page shows the technical details of what happened when the authorised researcher Linda Nab requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    perform_ccw_analysis_plr_haem
    Status:
    Status: Failed
    Job identifier:
    qmis7derqklq2zfe
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/cox_cens_control_all_plr_haem.rds - output/plr/models/haem/cox_cens_trt_all_plr_haem.rds
  • Action:
    perform_ccw_analysis_mol_plr_haem
    Status:
    Status: Failed
    Job identifier:
    aouuvnzn6rxkmolq
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/cox_cens_control_molnupiravir_plr_haem.rds - output/plr/models/haem/cox_cens_trt_molnupiravir_plr_haem.rds
  • Action:
    perform_ccw_analysis_sot_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    kzdz333dybj2sggr
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/ba2_cox_cens_control_sotrovimab_plr_haem.rds - output/plr/models/haem/ba2_cox_cens_trt_sotrovimab_plr_haem.rds
  • Action:
    perform_ccw_analysis_mol_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    kv6t6stkxtpa2eqv
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/ba2_cox_cens_control_molnupiravir_plr_haem.rds - output/plr/models/haem/ba2_cox_cens_trt_molnupiravir_plr_haem.rds
  • Action:
    perform_ccw_analysis_sot_plr_haem
    Status:
    Status: Failed
    Job identifier:
    rluckg5bxw2vo4ys
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/cox_cens_control_sotrovimab_plr_haem.rds - output/plr/models/haem/cox_cens_trt_sotrovimab_plr_haem.rds
  • Action:
    perform_ccw_analysis_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    eyjlzjwrt7zihnfx
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/ba2_cox_cens_control_all_plr_haem.rds - output/plr/models/haem/ba2_cox_cens_trt_all_plr_haem.rds
  • Action:
    calc_smd_plr_haem
    Status:
    Status: Failed
    Job identifier:
    rmf6psq7i3ygmfkw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_mol_plr_haem
    Status:
    Status: Failed
    Job identifier:
    mtpv6c75beim2msk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_sot_plr_haem
    Status:
    Status: Failed
    Job identifier:
    da45ls72hyum6mts
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    3pzhxjwhjsbnektm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_sot_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    36hbu2bo3ewnnjlx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_plr_haem
    Status:
    Status: Failed
    Job identifier:
    r3gvredpnmp7y3kz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_mol_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    vhgmt4bvn4dc6afz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_mol_plr_haem
    Status:
    Status: Failed
    Job identifier:
    sadgtjhpt6e4heus
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_sot_plr_haem
    Status:
    Status: Failed
    Job identifier:
    hjwnndxobmxqedef
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    ktdicioyscu7k6un
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_mol_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    tavwjsrbvhicg3e5
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    save_coef_weight_models_plr_haem
    Status:
    Status: Failed
    Job identifier:
    nuyyk6yg5r2qhkqj
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    save_coef_weight_models_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    d4b7jf7jd5cylg56
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_sot_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    d3e6eajstmmavg3i
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:03:22

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Requested by
Linda Nab
Branch
ccw-analysis
Force run dependencies
No
Git commit hash
cfb7494
Requested actions
  • perform_ccw_analysis_plr_haem
  • perform_ccw_analysis_mol_plr_haem
  • perform_ccw_analysis_sot_plr_haem
  • save_coef_weight_models_plr_haem
  • perform_ccw_analysis_plr_haem_ba2
  • perform_ccw_analysis_mol_plr_haem_ba2
  • perform_ccw_analysis_sot_plr_haem_ba2
  • save_coef_weight_models_plr_haem_ba2
  • calc_smd_plr_haem
  • calc_smd_mol_plr_haem
  • calc_smd_sot_plr_haem
  • calc_smd_plr_haem_ba2
  • calc_smd_mol_plr_haem_ba2
  • calc_smd_sot_plr_haem_ba2
  • dens_weights_plr_haem
  • dens_weights_mol_plr_haem
  • dens_weights_sot_plr_haem
  • dens_weights_plr_haem_ba2
  • dens_weights_mol_plr_haem_ba2
  • dens_weights_sot_plr_haem_ba2

Code comparison

Compare the code used in this Job Request