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Job request: 16339

Organisation:
Bennett Institute
Workspace:
mabsavs-usernonuser-ccw
ID:
imwrg7kuv7tw2ffq

This page shows the technical details of what happened when the authorised researcher Linda Nab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    perform_ccw_analysis_plr_haem
    Status:
    Status: Failed
    Job identifier:
    qmis7derqklq2zfe
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/cox_cens_control_all_plr_haem.rds - output/plr/models/haem/cox_cens_trt_all_plr_haem.rds
  • Action:
    perform_ccw_analysis_mol_plr_haem
    Status:
    Status: Failed
    Job identifier:
    aouuvnzn6rxkmolq
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/cox_cens_control_molnupiravir_plr_haem.rds - output/plr/models/haem/cox_cens_trt_molnupiravir_plr_haem.rds
  • Action:
    perform_ccw_analysis_sot_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    kzdz333dybj2sggr
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/ba2_cox_cens_control_sotrovimab_plr_haem.rds - output/plr/models/haem/ba2_cox_cens_trt_sotrovimab_plr_haem.rds
  • Action:
    perform_ccw_analysis_mol_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    kv6t6stkxtpa2eqv
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/ba2_cox_cens_control_molnupiravir_plr_haem.rds - output/plr/models/haem/ba2_cox_cens_trt_molnupiravir_plr_haem.rds
  • Action:
    perform_ccw_analysis_sot_plr_haem
    Status:
    Status: Failed
    Job identifier:
    rluckg5bxw2vo4ys
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/cox_cens_control_sotrovimab_plr_haem.rds - output/plr/models/haem/cox_cens_trt_sotrovimab_plr_haem.rds
  • Action:
    perform_ccw_analysis_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    eyjlzjwrt7zihnfx
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/haem/ba2_cox_cens_control_all_plr_haem.rds - output/plr/models/haem/ba2_cox_cens_trt_all_plr_haem.rds
  • Action:
    calc_smd_plr_haem
    Status:
    Status: Failed
    Job identifier:
    rmf6psq7i3ygmfkw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_mol_plr_haem
    Status:
    Status: Failed
    Job identifier:
    mtpv6c75beim2msk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_sot_plr_haem
    Status:
    Status: Failed
    Job identifier:
    da45ls72hyum6mts
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    3pzhxjwhjsbnektm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_sot_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    36hbu2bo3ewnnjlx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_plr_haem
    Status:
    Status: Failed
    Job identifier:
    r3gvredpnmp7y3kz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_mol_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    vhgmt4bvn4dc6afz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_mol_plr_haem
    Status:
    Status: Failed
    Job identifier:
    sadgtjhpt6e4heus
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_sot_plr_haem
    Status:
    Status: Failed
    Job identifier:
    hjwnndxobmxqedef
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    ktdicioyscu7k6un
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_mol_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    tavwjsrbvhicg3e5
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    save_coef_weight_models_plr_haem
    Status:
    Status: Failed
    Job identifier:
    nuyyk6yg5r2qhkqj
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    save_coef_weight_models_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    d4b7jf7jd5cylg56
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_sot_plr_haem_ba2
    Status:
    Status: Failed
    Job identifier:
    d3e6eajstmmavg3i
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:03:22

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Requested by
Linda Nab
Branch
ccw-analysis
Force run dependencies
No
Git commit hash
cfb7494
Requested actions
  • perform_ccw_analysis_plr_haem
  • perform_ccw_analysis_mol_plr_haem
  • perform_ccw_analysis_sot_plr_haem
  • save_coef_weight_models_plr_haem
  • perform_ccw_analysis_plr_haem_ba2
  • perform_ccw_analysis_mol_plr_haem_ba2
  • perform_ccw_analysis_sot_plr_haem_ba2
  • save_coef_weight_models_plr_haem_ba2
  • calc_smd_plr_haem
  • calc_smd_mol_plr_haem
  • calc_smd_sot_plr_haem
  • calc_smd_plr_haem_ba2
  • calc_smd_mol_plr_haem_ba2
  • calc_smd_sot_plr_haem_ba2
  • dens_weights_plr_haem
  • dens_weights_mol_plr_haem
  • dens_weights_sot_plr_haem
  • dens_weights_plr_haem_ba2
  • dens_weights_mol_plr_haem_ba2
  • dens_weights_sot_plr_haem_ba2

Code comparison

Compare the code used in this job request