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Job request: 16348

Organisation:
Bennett Institute
Workspace:
mabsavs-usernonuser-ccw
ID:
bzy5esqqdhunivxs

This page shows the technical details of what happened when the authorised researcher Linda Nab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    perform_ccw_analysis_mol_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    rcjfxgxedv2c5oan
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/basehaz/transplant/basehaz_control_molnupiravir_plr_transplant.csv - output/plr/models/basehaz/transplant/basehaz_trt_molnupiravir_plr_transplant.csv
  • Action:
    perform_ccw_analysis_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    6iqetiu36ub3x5ep
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/basehaz/transplant/basehaz_control_all_plr_transplant.csv - output/plr/models/basehaz/transplant/basehaz_trt_all_plr_transplant.csv
  • Action:
    perform_ccw_analysis_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    2dqmkixm5deyez2m
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/basehaz/transplant/ba2_basehaz_control_all_plr_transplant.csv - output/plr/models/basehaz/transplant/ba2_basehaz_trt_all_plr_transplant.csv
  • Action:
    perform_ccw_analysis_mol_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    uubvojbwbj6r5if3
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/basehaz/transplant/ba2_basehaz_control_molnupiravir_plr_transplant.csv - output/plr/models/basehaz/transplant/ba2_basehaz_trt_molnupiravir_plr_transplant.csv
  • Action:
    perform_ccw_analysis_sot_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    qwzymsuhh7f6vkso
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/basehaz/transplant/basehaz_control_sotrovimab_plr_transplant.csv - output/plr/models/basehaz/transplant/basehaz_trt_sotrovimab_plr_transplant.csv
  • Action:
    perform_ccw_analysis_sot_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    qziskivehqmdiqud
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/models/basehaz/transplant/ba2_basehaz_control_sotrovimab_plr_transplant.csv - output/plr/models/basehaz/transplant/ba2_basehaz_trt_sotrovimab_plr_transplant.csv
  • Action:
    calc_smd_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    q4g6sdkjpbehvjio
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    lxrwo62zwujx5otc
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_mol_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    mlak5ezcbaold7un
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_sot_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    rn5m32zrsvxemaqt
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_mol_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    vala53p45qtt2z6x
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_sot_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    icxfiqpil5pla7ct
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_mol_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    w2q7tr5gkaabbbfe
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_sot_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    3p3qtgsf22zuctr3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    dens_weights_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    yp5q2j7vwhysqt7x
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    save_coef_weight_models_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    e4hl6uwwdpc5cgmz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    save_coef_weight_models_plr_transplant_ba2
    Status:
    Status: Failed
    Job identifier:
    hwzhwvon4w6atkxf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    nrwtstbyqagtj5uf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_mol_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    roiyd6v5j45sjhnm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    calc_smd_sot_plr_transplant
    Status:
    Status: Failed
    Job identifier:
    vawif4asidthrldb
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:02:32

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Requested by
Linda Nab
Branch
ccw-analysis
Force run dependencies
No
Git commit hash
0db98e8
Requested actions
  • perform_ccw_analysis_plr_transplant
  • perform_ccw_analysis_mol_plr_transplant
  • perform_ccw_analysis_sot_plr_transplant
  • save_coef_weight_models_plr_transplant
  • perform_ccw_analysis_plr_transplant_ba2
  • perform_ccw_analysis_mol_plr_transplant_ba2
  • perform_ccw_analysis_sot_plr_transplant_ba2
  • save_coef_weight_models_plr_transplant_ba2
  • calc_smd_plr_transplant
  • calc_smd_mol_plr_transplant
  • calc_smd_sot_plr_transplant
  • calc_smd_plr_transplant_ba2
  • calc_smd_mol_plr_transplant_ba2
  • calc_smd_sot_plr_transplant_ba2
  • dens_weights_plr_transplant
  • dens_weights_mol_plr_transplant
  • dens_weights_sot_plr_transplant
  • dens_weights_plr_transplant_ba2
  • dens_weights_mol_plr_transplant_ba2
  • dens_weights_sot_plr_transplant_ba2

Code comparison

Compare the code used in this job request