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Job request: 17431

Organisation:
Bennett Institute
Workspace:
mabsavs-usernonuser-ccw
ID:
agkp7z6mpmirpgko
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Linda Nab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    dens_weights_mol_plr_grace4_ba2
    Status:
    Status: Succeeded
    Job identifier:
    cs7o4f63w3udbavo
  • Action:
    calc_smd_sot_plr_grace4_ba2
    Status:
    Status: Failed
    Job identifier:
    bwgx2qvpc2sug6rl
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/tables/ccw/grace4/ba2_smd_sotrovimab_plr.csv
  • Action:
    dens_weights_sot_plr_grace4_ba2
    Status:
    Status: Succeeded
    Job identifier:
    qux45rhej4nt73gl
  • Action:
    calc_smd_sot_plr_grace4
    Status:
    Status: Failed
    Job identifier:
    mjfjvaoddwtaimuv
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/tables/ccw/grace4/smd_sotrovimab_plr.csv
  • Action:
    dens_weights_sot_plr_grace4
    Status:
    Status: Succeeded
    Job identifier:
    fpj42skuwat4huig
  • Action:
    calc_smd_mol_plr_grace4_ba2
    Status:
    Status: Failed
    Job identifier:
    5code546r54vdnnd
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/tables/ccw/grace4/ba2_smd_molnupiravir_plr.csv
  • Action:
    describe_flow_data_long_plr
    Status:
    Status: Succeeded
    Job identifier:
    evmxu3wudklchivm
  • Action:
    dens_weights_plr_grace4_ba2
    Status:
    Status: Succeeded
    Job identifier:
    jtki4fx5uexxoam7
  • Action:
    dens_weights_mol_plr_grace4
    Status:
    Status: Succeeded
    Job identifier:
    ksry3dekc4leaxuw
  • Action:
    dens_weights_plr_grace4
    Status:
    Status: Succeeded
    Job identifier:
    bw5mqjn4irag2m5b
  • Action:
    calc_smd_plr_grace4
    Status:
    Status: Failed
    Job identifier:
    ept3yiofbnk5f75k
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/tables/ccw/grace4/smd_all_plr.csv
  • Action:
    calc_smd_plr_grace4_ba2
    Status:
    Status: Failed
    Job identifier:
    4dtnpru5quyjqbg5
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/tables/ccw/grace4/ba2_smd_all_plr.csv
  • Action:
    calc_smd_mol_plr_grace4
    Status:
    Status: Failed
    Job identifier:
    kuh5jstrjneznmnc
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/tables/ccw/grace4/smd_molnupiravir_plr.csv

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 01:34:25

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
mabsavs-usernonuser-ccw
Requested by
Linda Nab
Branch
ccw-analysis
Force run dependencies
No
Git commit hash
39f05f6
Requested actions
  • describe_flow_data_long_plr
  • calc_smd_plr_grace4
  • calc_smd_mol_plr_grace4
  • calc_smd_sot_plr_grace4
  • calc_smd_plr_grace4_ba2
  • calc_smd_mol_plr_grace4_ba2
  • calc_smd_sot_plr_grace4_ba2
  • dens_weights_plr_grace4
  • dens_weights_mol_plr_grace4
  • dens_weights_sot_plr_grace4
  • dens_weights_plr_grace4_ba2
  • dens_weights_mol_plr_grace4_ba2
  • dens_weights_sot_plr_grace4_ba2

Code comparison

Compare the code used in this job request