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Job request: 21424

Organisation:
Bennett Institute
Workspace:
mabsavs-usernonuser-ccw
ID:
is7gg7oozxst4j6l
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Linda Nab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    create_table_ccw_plr_grace4
    Status:
    Succeeded
    Job identifier:
    vsme4ozzj3nt53u7
  • Action:
    create_table_ccw_plr_grace4_ba2
    Status:
    Succeeded
    Job identifier:
    yex5f3d5i2vjtkgk
  • Action:
    perform_ccw_analysis_mol_plr_grace3
    Status:
    Succeeded
    Job identifier:
    xjemkliwhevazl3z
  • Action:
    perform_ccw_analysis_mol_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    6cgavskdr42x677i
  • Action:
    perform_ccw_analysis_plr_grace3
    Status:
    Succeeded
    Job identifier:
    vrk3dao2vvolutes
  • Action:
    perform_ccw_analysis_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    dmrmnpk5l4gbcsdc
  • Action:
    perform_ccw_analysis_sot_plr_grace3
    Status:
    Succeeded
    Job identifier:
    dy4xghxhzurnwxjg
  • Action:
    perform_ccw_analysis_sot_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    pptc4se3j5e6r4re
  • Action:
    calc_smd_mol_plr_grace3
    Status:
    Succeeded
    Job identifier:
    j5pegoakukrdprbi
  • Action:
    calc_smd_mol_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    wn4ffwjifnfcbcat
  • Action:
    calc_smd_plr_grace3
    Status:
    Succeeded
    Job identifier:
    j4yxh23gidsyukzd
  • Action:
    calc_smd_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    hwpafyrj35ybcony
  • Action:
    calc_smd_sot_plr_grace3
    Status:
    Succeeded
    Job identifier:
    tg4bey5nfjc67k3s
  • Action:
    create_table_ccw_plr_grace3
    Status:
    Succeeded
    Job identifier:
    5rg6vknierutdu2u
  • Action:
    dens_weights_mol_plr_grace3
    Status:
    Succeeded
    Job identifier:
    nt5gu3xddd563rph
  • Action:
    dens_weights_mol_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    lwtv2tchfwqrngrh
  • Action:
    dens_weights_plr_grace3
    Status:
    Succeeded
    Job identifier:
    z7nqk7ucniqsa6ly
  • Action:
    calc_smd_sot_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    ru6lo3qpnzrv5v3y
  • Action:
    create_table_ccw_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    bfqf3okeowljt7rt
  • Action:
    dens_weights_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    hz5uyiml2sjqh6h5
  • Action:
    dens_weights_sot_plr_grace3
    Status:
    Succeeded
    Job identifier:
    5xw4wuzpieqgl5nl
  • Action:
    dens_weights_sot_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    ibq7dmu7q3jmix5k
  • Action:
    describe_flow_data_long_plr_grace3
    Status:
    Succeeded
    Job identifier:
    2h6c6d5badmigbwi
  • Action:
    describe_flow_data_long_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    wwvgpqrlt54bh2ov
  • Action:
    save_coef_weight_models_plr_grace3
    Status:
    Succeeded
    Job identifier:
    2mnxigan76ig7r5u
  • Action:
    save_coef_weight_models_plr_grace3_ba2
    Status:
    Succeeded
    Job identifier:
    3hj5o3zb4czlod2a
  • Action:
    save_coef_weight_models_plr_grace4
    Status:
    Succeeded
    Job identifier:
    leh7r7gcow7xx7gb
  • Action:
    save_coef_weight_models_plr_grace4_ba2
    Status:
    Succeeded
    Job identifier:
    z37tp744zco5c5fv
  • Action:
    perform_ccw_analysis_mol_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    a3ygsdgzkoskrz56
  • Action:
    perform_ccw_analysis_sot_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    53ntny3lkugy4m6d
  • Action:
    perform_ccw_analysis_mol_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    2tos3fa5y4ktduvn
  • Action:
    perform_ccw_analysis_sot_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    3c55pmfetvxhcvyy
  • Action:
    describe_flow_data_long_primary_combined_plr
    Status:
    Failed
    Job identifier:
    qvnayme2ne23wpgd
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/data_properties/data_long/grace4/flow_data_all_primary_combined_plr.csv - output/plr/data_properties/data_long/grace4/flow_data_redacted_all_primary_combined_plr.csv
  • Action:
    describe_flow_data_long_primary_combined_plr_ba2
    Status:
    Failed
    Job identifier:
    g2kuirqfpipdx24r
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/plr/data_properties/data_long/grace4/ba2_flow_data_all_primary_combined_plr.csv - output/plr/data_properties/data_long/grace4/ba2_flow_data_redacted_all_primary_combined_plr.csv
  • Action:
    calc_smd_sot_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    i33m47mg5jrj3aas
  • Action:
    calc_smd_mol_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    q2kplrqbirbdkaq2
  • Action:
    calc_smd_sot_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    u34g56rlpycgzklv
  • Action:
    dens_weights_sot_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    mue2cacdvj2qlun6
  • Action:
    dens_weights_mol_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    akly53bbofuq7s2r
  • Action:
    dens_weights_sot_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    bgf2fv5joseuz54a
  • Action:
    plot_km_sot_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    yzgfzud6ssrwz34c
  • Action:
    plot_km_mol_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    hytkpat7kev5evjs
  • Action:
    plot_km_sot_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    5owen2ysaialo363
  • Action:
    calc_smd_mol_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    nzqcle36i7fehrrm
  • Action:
    dens_weights_mol_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    luj5eozlgold3lja
  • Action:
    plot_km_mol_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    ic57tpu2fovu3krl
  • Action:
    create_table_ccw_primary_combined_plr
    Status:
    Succeeded
    Job identifier:
    hfr5tdwszz2abkfk
  • Action:
    create_table_ccw_primary_combined_plr_ba2
    Status:
    Succeeded
    Job identifier:
    5gn4qmmogqauzva6

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 07:17:40

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
mabsavs-usernonuser-ccw
Requested by
Linda Nab
Branch
ccw-analysis
Force run dependencies
No
Git commit hash
eb951f7
Requested actions
  • save_coef_weight_models_plr_grace4
  • save_coef_weight_models_plr_grace4_ba2
  • perform_ccw_analysis_plr_grace3
  • perform_ccw_analysis_mol_plr_grace3
  • perform_ccw_analysis_sot_plr_grace3
  • save_coef_weight_models_plr_grace3
  • perform_ccw_analysis_plr_grace3_ba2
  • perform_ccw_analysis_mol_plr_grace3_ba2
  • perform_ccw_analysis_sot_plr_grace3_ba2
  • save_coef_weight_models_plr_grace3_ba2
  • calc_smd_plr_grace3
  • calc_smd_mol_plr_grace3
  • calc_smd_sot_plr_grace3
  • calc_smd_plr_grace3_ba2
  • calc_smd_mol_plr_grace3_ba2
  • calc_smd_sot_plr_grace3_ba2
  • dens_weights_plr_grace3
  • dens_weights_mol_plr_grace3
  • dens_weights_sot_plr_grace3
  • dens_weights_plr_grace3_ba2
  • dens_weights_mol_plr_grace3_ba2
  • dens_weights_sot_plr_grace3_ba2
  • describe_flow_data_long_plr_grace3
  • describe_flow_data_long_plr_grace3_ba2
  • perform_ccw_analysis_mol_primary_combined_plr
  • perform_ccw_analysis_sot_primary_combined_plr
  • perform_ccw_analysis_mol_primary_combined_plr_ba2
  • perform_ccw_analysis_sot_primary_combined_plr_ba2
  • calc_smd_mol_primary_combined_plr
  • calc_smd_sot_primary_combined_plr
  • calc_smd_mol_primary_combined_plr_ba2
  • calc_smd_sot_primary_combined_plr_ba2
  • dens_weights_mol_primary_combined_plr
  • dens_weights_sot_primary_combined_plr
  • dens_weights_mol_primary_combined_plr_ba2
  • dens_weights_sot_primary_combined_plr_ba2
  • describe_flow_data_long_primary_combined_plr
  • describe_flow_data_long_primary_combined_plr_ba2
  • plot_km_mol_primary_combined_plr
  • plot_km_sot_primary_combined_plr
  • plot_km_mol_primary_combined_plr_ba2
  • plot_km_sot_primary_combined_plr_ba2
  • create_table_ccw_plr_grace4
  • create_table_ccw_plr_grace4_ba2
  • create_table_ccw_plr_grace3
  • create_table_ccw_plr_grace3_ba2
  • create_table_ccw_primary_combined_plr
  • create_table_ccw_primary_combined_plr_ba2

Code comparison

Compare the code used in this job request