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Job request: 467

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
anticoagulant-first-run
ID:
c6l26dlc5ggr5d3g
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Angel Wong requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    create_dataset_af_match
    Status:
    Succeeded
    Job identifier:
    kvt7f2nirj67tn5c
  • Action:
    09a_an_models_plot_af_oac_admitcovid
    Status:
    Succeeded
    Job identifier:
    jj3pwzg6i4wbrjy6
  • Action:
    02c_cr_create_population_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    cbqiwlmdwjdz7z5r
  • Action:
    02c_cr_create_population_af_match_admitcovid
    Status:
    Succeeded
    Job identifier:
    inahw7w6dgfohvid
  • Action:
    02c_cr_create_population_af_match_covidtest
    Status:
    Succeeded
    Job identifier:
    khrhrqy5rlbkbh6x
  • Action:
    02c_cr_create_population_af_match_positivecovidtest
    Status:
    Succeeded
    Job identifier:
    savrkcbu3553rybv
  • Action:
    03_an_checks_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    mbu7sgal2v2gzuaq
  • Action:
    04_an_descriptive_table_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    6w7uoiqmlmfemzxp
  • Action:
    05c_an_models_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    3dqp7cusp4cfxpog
  • Action:
    06c_an_models_ethnicity_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    fdv74y7le2eu5qdx
  • Action:
    03_an_checks_af_match_admitcovid
    Status:
    Succeeded
    Job identifier:
    bt4jdozrjt4wyyum
  • Action:
    03_an_checks_af_match_covidtest
    Status:
    Succeeded
    Job identifier:
    lje7mklckkg34qxp
  • Action:
    03_an_checks_af_match_positivecovidtest
    Status:
    Succeeded
    Job identifier:
    jyzyqsdeatrboh6j
  • Action:
    09a_an_models_plot_af_match_onscoviddeath
    Status:
    Failed
    Job identifier:
    sffwigm7ukfmxdk2
    Error:
    Job exited with an error code
  • Action:
    04_an_descriptive_table_af_match_admitcovid
    Status:
    Succeeded
    Job identifier:
    vsf7azdk3xlis5aa
  • Action:
    05c_an_models_af_match_admitcovid
    Status:
    Succeeded
    Job identifier:
    dukv5sh44d6f5p4u
  • Action:
    07_an_model_explore_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    szqk72gsrczymivz
  • Action:
    06c_an_models_ethnicity_af_match_admitcovid
    Status:
    Succeeded
    Job identifier:
    e542jmy2mwwyj2ze
  • Action:
    04_an_descriptive_table_af_match_covidtest
    Status:
    Succeeded
    Job identifier:
    52krzkonayn274mk
  • Action:
    04_an_descriptive_table_af_match_positivecovidtest
    Status:
    Succeeded
    Job identifier:
    msiou4ulzwmks3p5
  • Action:
    05c_an_models_af_match_covidtest
    Status:
    Succeeded
    Job identifier:
    fvibjystq5caps6z
  • Action:
    09a_an_models_plot_af_match_admitcovid
    Status:
    Failed
    Job identifier:
    kfrzbru3e3dlyljh
    Error:
    Job exited with an error code
  • Action:
    06c_an_models_ethnicity_af_match_covidtest
    Status:
    Succeeded
    Job identifier:
    wm4tyfnls27m2u7k
  • Action:
    05c_an_models_af_match_positivecovidtest
    Status:
    Succeeded
    Job identifier:
    nfguk5toed2zvj65
  • Action:
    07_an_model_explore_af_match_admitcovid
    Status:
    Succeeded
    Job identifier:
    wi366jv7l4vbom6o
  • Action:
    09b_an_models_plot_af_warfarin_onscoviddeath
    Status:
    Failed
    Job identifier:
    tt2wlh2ktc67lhdb
    Error:
    No outputs found matching patterns: - output/warfarin_tabfig/adj_curves_onscoviddeath.svg
  • Action:
    09b_an_models_plot_af_warfarin_admitcovid
    Status:
    Failed
    Job identifier:
    4zvvvfsvmtmaoese
    Error:
    No outputs found matching patterns: - output/warfarin_tabfig/adj_curves_admitcovid.svg
  • Action:
    06c_an_models_ethnicity_af_match_positivecovidtest
    Status:
    Succeeded
    Job identifier:
    vbdo4swqyph7vbqf
  • Action:
    09b_an_models_plot_af_warfarin_covidtest
    Status:
    Failed
    Job identifier:
    tgy5x2ja336quo3z
    Error:
    No outputs found matching patterns: - output/warfarin_tabfig/adj_curves_covidtest.svg
  • Action:
    09b_an_models_plot_af_warfarin_onsnoncoviddeath
    Status:
    Failed
    Job identifier:
    zhqbghqdwuv5zzhp
    Error:
    No outputs found matching patterns: - output/warfarin_tabfig/adj_curves_onsnoncoviddeath.svg
  • Action:
    09b_an_models_plot_af_warfarin_positivecovidtest
    Status:
    Failed
    Job identifier:
    jgtgmc4l64z4umq3
    Error:
    No outputs found matching patterns: - output/warfarin_tabfig/adj_curves_positivecovidtest.svg
  • Action:
    08c_an_model_checks_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    4lm2wdsdc7tg3y5n
  • Action:
    08c_an_model_checks_af_match_admitcovid
    Status:
    Succeeded
    Job identifier:
    7h5nt4twsgz7hs4b
  • Action:
    09a_an_models_plot_af_match_covidtest
    Status:
    Succeeded
    Job identifier:
    dvxbcsufonvkogat
  • Action:
    09a_an_models_plot_af_match_positivecovidtest
    Status:
    Succeeded
    Job identifier:
    432iatxy3ov2o7hb
  • Action:
    08c_an_model_checks_af_match_covidtest
    Status:
    Succeeded
    Job identifier:
    p5duhodvjylqvgs2
  • Action:
    08c_an_model_checks_af_match_positivecovidtest
    Status:
    Succeeded
    Job identifier:
    sruv7yetkgcvbgba

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:05:06

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
anticoagulant-first-run
Requested by
Angel Wong
Branch
master
Force run dependencies
No
Git commit hash
fa9ae01
Requested actions
  • 09a_an_models_plot_af_oac_admitcovid
  • 09b_an_models_plot_af_warfarin_onscoviddeath
  • 09b_an_models_plot_af_warfarin_admitcovid
  • 09b_an_models_plot_af_warfarin_onsnoncoviddeath
  • 09b_an_models_plot_af_warfarin_covidtest
  • 09b_an_models_plot_af_warfarin_positivecovidtest
  • create_dataset_af_match
  • 02c_cr_create_population_af_match_onscoviddeath
  • 03_an_checks_af_match_onscoviddeath
  • 04_an_descriptive_table_af_match_onscoviddeath
  • 05c_an_models_af_match_onscoviddeath
  • 06c_an_models_ethnicity_af_match_onscoviddeath
  • 07_an_model_explore_af_match_onscoviddeath
  • 08c_an_model_checks_af_match_onscoviddeath
  • 09a_an_models_plot_af_match_onscoviddeath
  • 02c_cr_create_population_af_match_admitcovid
  • 03_an_checks_af_match_admitcovid
  • 04_an_descriptive_table_af_match_admitcovid
  • 05c_an_models_af_match_admitcovid
  • 06c_an_models_ethnicity_af_match_admitcovid
  • 07_an_model_explore_af_match_admitcovid
  • 08c_an_model_checks_af_match_admitcovid
  • 09a_an_models_plot_af_match_admitcovid
  • 02c_cr_create_population_af_match_covidtest
  • 03_an_checks_af_match_covidtest
  • 04_an_descriptive_table_af_match_covidtest
  • 05c_an_models_af_match_covidtest
  • 06c_an_models_ethnicity_af_match_covidtest
  • 08c_an_model_checks_af_match_covidtest
  • 09a_an_models_plot_af_match_covidtest
  • 02c_cr_create_population_af_match_positivecovidtest
  • 03_an_checks_af_match_positivecovidtest
  • 04_an_descriptive_table_af_match_positivecovidtest
  • 05c_an_models_af_match_positivecovidtest
  • 06c_an_models_ethnicity_af_match_positivecovidtest
  • 08c_an_model_checks_af_match_positivecovidtest
  • 09a_an_models_plot_af_match_positivecovidtest

Code comparison

Compare the code used in this job request