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Job request: 821

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
anticoagulant-second-run
ID:
espszukagp5k3xqi
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Angel Wong requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    03_an_checks_af_oac_onscoviddeath
    Status:
    Failed
    Job identifier:
    23keg4dgz37denvj
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    04_an_descriptive_table_af_oac_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    c6sybx5ypd7ijjiv
  • Action:
    03_an_checks_af_oac_admitcovid
    Status:
    Failed
    Job identifier:
    lhdyfkls7kskeaib
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_oac_covidtest
    Status:
    Failed
    Job identifier:
    nrlftnaizqjgics4
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_oac_positivecovidtest
    Status:
    Failed
    Job identifier:
    snooxm3dwein5afc
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_warfarin_onscoviddeath
    Status:
    Failed
    Job identifier:
    gwnsvffqi3ljfirs
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    04_an_descriptive_table_af_warfarin_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    lklivuf34djkw6ms
  • Action:
    03_an_checks_af_warfarin_admitcovid
    Status:
    Failed
    Job identifier:
    62tcjwknoz5lldpj
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_warfarin_onsnoncoviddeath
    Status:
    Failed
    Job identifier:
    5nhgwhxbybnnfuvs
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_warfarin_covidtest
    Status:
    Failed
    Job identifier:
    l2r5qc5ebaeg7xog
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_warfarin_positivecovidtest
    Status:
    Failed
    Job identifier:
    bnmunlwyyxjin5nz
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_match_onscoviddeath
    Status:
    Failed
    Job identifier:
    timmb7xmqmmcs7jk
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    04_an_descriptive_table_af_match_onscoviddeath
    Status:
    Succeeded
    Job identifier:
    hvtm6tmcc2t3o4rd
  • Action:
    03_an_checks_af_match_admitcovid
    Status:
    Failed
    Job identifier:
    irv5ymjrqildrrfc
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_match_covidtest
    Status:
    Failed
    Job identifier:
    wwcskvnn4n37xh2z
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    03_an_checks_af_match_positivecovidtest
    Status:
    Failed
    Job identifier:
    objynmauko5rxbka
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    04_an_descriptive_table_af_match_onscoviddeath_second
    Status:
    Succeeded
    Job identifier:
    l7lkpiplp7xbgwko

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 01:13:55

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
anticoagulant-second-run
Requested by
Angel Wong
Branch
master
Force run dependencies
No
Git commit hash
d88749e
Requested actions
  • 03_an_checks_af_oac_onscoviddeath
  • 04_an_descriptive_table_af_oac_onscoviddeath
  • 03_an_checks_af_oac_admitcovid
  • 03_an_checks_af_oac_covidtest
  • 03_an_checks_af_oac_positivecovidtest
  • 03_an_checks_af_warfarin_onscoviddeath
  • 04_an_descriptive_table_af_warfarin_onscoviddeath
  • 03_an_checks_af_warfarin_admitcovid
  • 03_an_checks_af_warfarin_onsnoncoviddeath
  • 03_an_checks_af_warfarin_covidtest
  • 03_an_checks_af_warfarin_positivecovidtest
  • 03_an_checks_af_match_onscoviddeath
  • 04_an_descriptive_table_af_match_onscoviddeath
  • 03_an_checks_af_match_admitcovid
  • 03_an_checks_af_match_covidtest
  • 03_an_checks_af_match_positivecovidtest
  • 04_an_descriptive_table_af_match_onscoviddeath_second

Code comparison

Compare the code used in this job request