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Job request: 25499

Organisation:
Bennett Institute
Workspace:
death-report-2
ID:
jdchgg3qq22epiez
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Andrea Schaffer requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    dataset_definition
    Status:
    Status: Succeeded
    Job identifier:
    kk5vvgvqgexipt3o
  • Action:
    death_coding
    Status:
    Status: Failed
    Job identifier:
    f25ak2ufwca6kntm
    Error:
    nonzero_exit: Job exited with an error

Pipeline

Show project.yaml 
version: '4.0'

actions:
#Dataset for diff time
  dataset_definition:
    run: ehrql:v1 generate-dataset analysis/dataset_definition.py --output output/dataset_definition.csv.gz
    outputs:
      highly_sensitive:
        dataset: output/dataset_definition.csv.gz
  
  death_coding:
    run: r:v2 analysis/death_coding/check_death_coding.R
      --output output/death_coding/check_death_coding.csv 
    needs: [dataset_definition]
    outputs:
      moderately_sensitive:
        tables: output/death_coding/check_death_coding.csv

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:08:06

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
death-report-2
Requested by
Andrea Schaffer
Branch
main
Force run dependencies
No
Git commit hash
909be19
Requested actions
  • dataset_definition
  • death_coding

Code comparison

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