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Job request: 18169

Organisation:
University of Manchester
Workspace:
ab_covid_rf
ID:
logbfo5baxcmzxfo
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Ya-Ting Yang requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    matching_ratio1
    Status:
    Status: Succeeded
    Job identifier:
    tbxohxsut2zmpufv
  • Action:
    check_unmatched_ratio1
    Status:
    Status: Failed
    Job identifier:
    wubkaltxmrx6rvcy
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    extract_variables_ab_time_ratio1
    Status:
    Status: Failed
    Job identifier:
    6glzfc23hqdbedns
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    extract_variables_ratio1
    Status:
    Status: Succeeded
    Job identifier:
    wpj4hnwkv6hwnvsv
  • Action:
    process_Rmatching_ratio1
    Status:
    Status: Failed
    Job identifier:
    3sfuar7v2okqtikx
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/matched_outcome_ratio1.csv - output/abtype79_ratio1.rds
  • Action:
    process_ab_time_ratio1
    Status:
    Status: Failed
    Job identifier:
    jg4afnty7jdsoldo
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    pre_RF_process_ratio1
    Status:
    Status: Failed
    Job identifier:
    5ozk664kf4gz45e3
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 01:30:28

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
ab_covid_rf
Requested by
Ya-Ting Yang
Branch
ab_covid_rf
Force run dependencies
No
Git commit hash
0af9eb9
Requested actions
  • matching_ratio1
  • check_unmatched_ratio1
  • extract_variables_ratio1
  • process_Rmatching_ratio1
  • extract_variables_ab_time_ratio1
  • process_ab_time_ratio1
  • pre_RF_process_ratio1

Code comparison

Compare the code used in this job request