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Job request: 624

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
carehomes-short-data-report
ID:
wlbaewftgr2w3smk
View repo View project.yaml

This page shows the technical details of what happened when authorised researcher Emily Nightingale requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the indicated Requested Actions with the Pipeline section below, you can infer what security level various outputs were written to. Outputs marked as highly_sensitive can never be viewed directly by a researcher; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    run_report
    Status:
    Status: Succeeded
    Job identifier:
    cgriitd3352d2lle

Pipeline

Show project.yaml 
version: '3.0'

expectations:
  population_size: 1000

actions:

  generate_study_population:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv

  run_report:
    run: r:latest analysis/report.R output/input.csv
    needs: [generate_study_population]
    outputs:
      moderately_sensitive:
        log: report_output.txt

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:00:03

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Succeeded
Backend
TPP
Workspace
carehomes-short-data-report
Requested by
Emily Nightingale
Branch
first-commit
Force run dependencies
No
Git commit hash
f5b6844
Requested actions
  • run_report

Code comparison

Compare the code used in this Job Request