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Job request: 3389

Organisation:
Bennett Institute
Workspace:
comparative-ve-research_main
ID:
hpfzk37hiq7qdtjl
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract
    Status:
    Status: Succeeded
    Job identifier:
    ph4cxkxrqbsg2shs
  • Action:
    data_process
    Status:
    Status: Failed
    Job identifier:
    fhqohkuc4wstuo3v
    Error:
    No outputs found matching patterns: - output/data/data_disagnoses.rds
  • Action:
    data_selection
    Status:
    Status: Failed
    Job identifier:
    hqxzt4d6tkhgzrf7
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_table1
    Status:
    Status: Failed
    Job identifier:
    vun7nxbmjbdq4ita
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_irr
    Status:
    Status: Failed
    Job identifier:
    l2l3jdblmcsyknef
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_km
    Status:
    Status: Failed
    Job identifier:
    syivl55kyru2gavz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_diagnoses
    Status:
    Status: Failed
    Job identifier:
    szdk3v2o7gem5ydc
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_table1_allvax
    Status:
    Status: Failed
    Job identifier:
    elpxn5ammy5d57xq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_vaxdate
    Status:
    Status: Failed
    Job identifier:
    nb4lteuwkiuntocq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_properties
    Status:
    Status: Failed
    Job identifier:
    dsfwnigzjtbnbpum
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 09:01:41

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
comparative-ve-research_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
113430c
Requested actions
  • extract
  • data_process
  • data_properties
  • data_selection
  • descr_table1
  • descr_table1_allvax
  • descr_irr
  • descr_km
  • descr_vaxdate
  • descr_diagnoses

Code comparison

Compare the code used in this job request