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Job request: 23618

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
disparities-comparison-rsv-flu-c19
ID:
kaetk6gdpw2wou6i
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Em Prestige requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_dataset_adults_s1_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    bfkv2hlrvalyirkn
  • Action:
    generate_dataset_adults_s4_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    vkgfavzj7wxdzeue
  • Action:
    generate_dataset_adults_s5_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    bu7lh2ebay27ctu7
  • Action:
    generate_dataset_adults_s5_specific_secondary
    Status:
    Succeeded
    Job identifier:
    crvzvarblugitgx3
  • Action:
    generate_dataset_adults_s6_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    groe5yqyri7vzfy7
  • Action:
    generate_dataset_adults_s6_specific_primary
    Status:
    Succeeded
    Job identifier:
    skctcypps6drfzyv
  • Action:
    collate_rates_tables_sensitive_primary_children_and_adolescents
    Status:
    Succeeded
    Job identifier:
    krow7p24mueto5nl
  • Action:
    collate_rates_tables_sensitive_primary_older_adults
    Status:
    Succeeded
    Job identifier:
    2fdjqluebwhqmlwj
  • Action:
    collate_rates_tables_specific_primary_children_and_adolescents
    Status:
    Succeeded
    Job identifier:
    pfrsy5fkzxiaoqw3
  • Action:
    collate_rates_tables_specific_primary_older_adults
    Status:
    Succeeded
    Job identifier:
    zf7rzfxjkbmayxfh
  • Action:
    collate_table1_tables_children_and_adolescents
    Status:
    Failed
    Job identifier:
    pgtv4n3mdlel6ski
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_table1_tables_older_adults
    Status:
    Failed
    Job identifier:
    3eu6vdrujqbn7anw
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    phenotype_sensitivity_adults_s2
    Status:
    Succeeded
    Job identifier:
    gb4ruin5tzk7ceae
  • Action:
    phenotype_sensitivity_adults_s3
    Status:
    Succeeded
    Job identifier:
    6keepq3y3nyenuns
  • Action:
    phenotype_sensitivity_children_and_adolescents_s1
    Status:
    Succeeded
    Job identifier:
    do5klqoymp7w3y4d
  • Action:
    phenotype_sensitivity_children_and_adolescents_s2
    Status:
    Succeeded
    Job identifier:
    7dm4soius2k6eol2
  • Action:
    phenotype_sensitivity_children_and_adolescents_s3
    Status:
    Succeeded
    Job identifier:
    bjrxnng2pizkv3da
  • Action:
    phenotype_sensitivity_children_and_adolescents_s4
    Status:
    Succeeded
    Job identifier:
    ftz6z3zrxdawxrh7
  • Action:
    phenotype_sensitivity_children_and_adolescents_s5
    Status:
    Succeeded
    Job identifier:
    m3fhkp4vahqqdqgj
  • Action:
    phenotype_sensitivity_children_and_adolescents_s6
    Status:
    Succeeded
    Job identifier:
    zkklff2hhgthtwfk
  • Action:
    phenotype_sensitivity_children_and_adolescents_s7
    Status:
    Succeeded
    Job identifier:
    jts73bnskgxqm5rr
  • Action:
    phenotype_sensitivity_infants_s1
    Status:
    Succeeded
    Job identifier:
    nxbrfi5ie5didfie
  • Action:
    phenotype_sensitivity_infants_s2
    Status:
    Succeeded
    Job identifier:
    dgrz3rl44azmr5ih
  • Action:
    phenotype_sensitivity_infants_s3
    Status:
    Succeeded
    Job identifier:
    ppvteh5y4kh6wxl7
  • Action:
    collate_phenotype_sensitivity_tables_children_and_adolescents
    Status:
    Succeeded
    Job identifier:
    ie4zktbysdnkpcq7
  • Action:
    phenotype_sensitivity_infants_s4
    Status:
    Succeeded
    Job identifier:
    pqziimdjnpdaedi6
  • Action:
    phenotype_sensitivity_infants_s5
    Status:
    Succeeded
    Job identifier:
    svwfig3aiqntrgxs
  • Action:
    phenotype_sensitivity_infants_s6
    Status:
    Failed
    Job identifier:
    2273mjdmaamufpv6
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    phenotype_sensitivity_older_adults_s1
    Status:
    Succeeded
    Job identifier:
    5u2t5unbpa7mldma
  • Action:
    phenotype_sensitivity_older_adults_s2
    Status:
    Succeeded
    Job identifier:
    lk4klvxot6hndf6g
  • Action:
    phenotype_sensitivity_older_adults_s3
    Status:
    Succeeded
    Job identifier:
    clj73jedql55ewtf
  • Action:
    phenotype_sensitivity_older_adults_s4
    Status:
    Succeeded
    Job identifier:
    ucq7mapf5udb6xed
  • Action:
    phenotype_sensitivity_older_adults_s5
    Status:
    Succeeded
    Job identifier:
    q5odly7mihcqlyni
  • Action:
    phenotype_sensitivity_older_adults_s6
    Status:
    Succeeded
    Job identifier:
    qjbof77gjj4jweji
  • Action:
    phenotype_sensitivity_older_adults_s7
    Status:
    Succeeded
    Job identifier:
    jlu54ptbv7op4gpc
  • Action:
    process_cohort_infants_s7_specific_secondary
    Status:
    Failed
    Job identifier:
    hdbsbhau6eroqbfj
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_adults_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    2mgrgfr3gpclkece
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_adults_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    wq4ujohno5dn6sde
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_infants_s7_sensitive_primary
    Status:
    Failed
    Job identifier:
    kgwozikt5pdhk2gs
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_infants_s7_specific_primary
    Status:
    Failed
    Job identifier:
    usq44edklnc5r4gd
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_older_adults_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    4jj57qtoqj4sp6fr
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_older_adults_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    yk5gkqkmnm3detmi
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_older_adults_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    p3fskjj4zy6f4jrp
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_children_and_adolescents_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    g5ud2fchufnaesd4
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_children_and_adolescents_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    trgidmaj27xn44aq
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_children_and_adolescents_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    7yjb7ijvyiymau5v
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_infants_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    wumt7l63ph2mx66t
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_phenotype_sensitivity_tables_older_adults
    Status:
    Succeeded
    Job identifier:
    4wtndkpo4tmtovbk
  • Action:
    process_dataset_infants_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    2emmp4o52yaowf4k
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_infants_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    p4kq7dsgywldblob
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    generate_dataset_adults_s6_specific_secondary
    Status:
    Succeeded
    Job identifier:
    d7ybp566xohropje
  • Action:
    process_dataset_adults_s6_specific_primary
    Status:
    Succeeded
    Job identifier:
    yozn5k6grd6m2zff
  • Action:
    describe_dataset_adults_s6_specific_primary
    Status:
    Succeeded
    Job identifier:
    whom43t5f6bgmssu
  • Action:
    generate_dataset_adults_s7_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    2ncvsknogdeepbro
  • Action:
    process_cohort_adults_s5_specific_secondary
    Status:
    Succeeded
    Job identifier:
    zqnhhhtbrp2kwkof
  • Action:
    process_dataset_adults_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    xgsyyxdxkrx6e5fe
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    describe_cohort_adults_s5
    Status:
    Succeeded
    Job identifier:
    l2uu2s3u735t25tg
  • Action:
    generate_dataset_adults_s7_specific_primary
    Status:
    Succeeded
    Job identifier:
    ne653e2gbqa7usoh
  • Action:
    process_cohort_adults_s6_specific_secondary
    Status:
    Succeeded
    Job identifier:
    nd3xotnvyj6k4k4f
  • Action:
    describe_cohort_adults_s6
    Status:
    Succeeded
    Job identifier:
    aj3f2lvotzdtaqwe
  • Action:
    collate_table1_tables_adults
    Status:
    Failed
    Job identifier:
    kg4j4sjcinfrv4rt
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_dataset_adults_s7_specific_primary
    Status:
    Succeeded
    Job identifier:
    h6usiunbln33pyw4
  • Action:
    describe_dataset_adults_s7_specific_primary
    Status:
    Succeeded
    Job identifier:
    xkwce5mwphxtdo7v
  • Action:
    process_dataset_adults_s4_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    i7ptiqwjjx3fee5f
  • Action:
    describe_dataset_adults_s4_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    fxnp5ncnamizb6ml
  • Action:
    phenotype_sensitivity_adults_s4
    Status:
    Succeeded
    Job identifier:
    finlwtbahxpovbwm
  • Action:
    process_dataset_adults_s5_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    u3h2ifda6a62aavv
  • Action:
    process_dataset_adults_s6_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    wacfwq577w7fcsuc
  • Action:
    describe_dataset_adults_s5_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    t4koi2jsdqip3kba
  • Action:
    phenotype_sensitivity_adults_s5
    Status:
    Succeeded
    Job identifier:
    figoegszdtd3eyrz
  • Action:
    describe_dataset_adults_s6_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    yhbb5jafyr5yhgih
  • Action:
    phenotype_sensitivity_adults_s6
    Status:
    Succeeded
    Job identifier:
    nlvrnm5bob76f6sy
  • Action:
    collate_rates_tables_specific_primary_adults
    Status:
    Succeeded
    Job identifier:
    wyao3rjntlsfbwxb
  • Action:
    process_dataset_adults_s1_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    q3eypcdrhubvrut2
  • Action:
    describe_dataset_adults_s1_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    3z6h4wuz4ecvpw4r
  • Action:
    phenotype_sensitivity_adults_s1
    Status:
    Succeeded
    Job identifier:
    sb7pdqcx3rhnsnuc
  • Action:
    process_dataset_adults_s7_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    cgi7kxmtbrrl3suz
  • Action:
    describe_dataset_adults_s7_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    pwuwyvtov37zwn5g
  • Action:
    phenotype_sensitivity_adults_s7
    Status:
    Succeeded
    Job identifier:
    ewq2b3kxrd5mdxsn
  • Action:
    collate_phenotype_sensitivity_tables_adults
    Status:
    Succeeded
    Job identifier:
    vjkykqbbzb4pjote
  • Action:
    collate_rates_tables_sensitive_primary_adults
    Status:
    Succeeded
    Job identifier:
    k5pxcpqvvwtx6hzz
  • Action:
    describe_dataset_older_adults_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    mrg244zgzt52vvgp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_older_adults_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    gyprevrzxffeyydd
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_older_adults_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    uqaznbyferkfokh3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    collate_table1_tables_infants
    Status:
    Failed
    Job identifier:
    akdldnhsmluuphzy
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_cohort_infants_s7
    Status:
    Failed
    Job identifier:
    wqzssbq5kfepdnrv
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_infants_s7_sensitive_primary
    Status:
    Failed
    Job identifier:
    3q5m6m5v4b6axn76
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    collate_rates_tables_sensitive_primary_infants
    Status:
    Failed
    Job identifier:
    ahorrgyibeotae5p
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_infants_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    cwo5w7aews52tbaf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    collate_rates_tables_specific_primary_infants
    Status:
    Failed
    Job identifier:
    pi2zqtjh6l32sgwt
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_infants_s7_specific_primary
    Status:
    Failed
    Job identifier:
    zs7yknnsemohouec
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_children_and_adolescents_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    2avfhxcpij5r4syo
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    collate_phenotype_sensitivity_tables_infants
    Status:
    Failed
    Job identifier:
    ixbd5ifz5egtx7eb
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_infants_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    gxduwcuyihj5nau2
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    phenotype_sensitivity_infants_s7
    Status:
    Failed
    Job identifier:
    p4oqmihncpa4bojl
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_infants_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    wt2i3hfyaycrhibh
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_children_and_adolescents_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    pri5xnxbxr4fja2n
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_adults_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    d3nro2c4a4ppacya
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_adults_s3_specific_secondary
    Status:
    Failed
    Job identifier:
    55253qc75w3iz4ye
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_adults_s2_specific_secondary
    Status:
    Failed
    Job identifier:
    g4dftzvrgfyq4p52
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    describe_dataset_children_and_adolescents_s5_specific_secondary
    Status:
    Failed
    Job identifier:
    kqobc5tpgiln7fbu
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 55:31:07

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
disparities-comparison-rsv-flu-c19
Requested by
Em Prestige
Branch
main
Force run dependencies
No
Git commit hash
ce5e944
Requested actions
  • generate_dataset_adults_s6_specific_primary
  • process_dataset_adults_s6_specific_primary
  • describe_dataset_adults_s6_specific_primary
  • generate_dataset_adults_s7_specific_primary
  • process_dataset_adults_s7_specific_primary
  • describe_dataset_adults_s7_specific_primary
  • process_dataset_infants_s7_specific_primary
  • describe_dataset_infants_s7_specific_primary
  • generate_dataset_adults_s1_sensitive_primary
  • process_dataset_adults_s1_sensitive_primary
  • describe_dataset_adults_s1_sensitive_primary
  • generate_dataset_adults_s4_sensitive_primary
  • process_dataset_adults_s4_sensitive_primary
  • describe_dataset_adults_s4_sensitive_primary
  • generate_dataset_adults_s5_sensitive_primary
  • process_dataset_adults_s5_sensitive_primary
  • describe_dataset_adults_s5_sensitive_primary
  • generate_dataset_adults_s6_sensitive_primary
  • process_dataset_adults_s6_sensitive_primary
  • describe_dataset_adults_s6_sensitive_primary
  • generate_dataset_adults_s7_sensitive_primary
  • process_dataset_adults_s7_sensitive_primary
  • describe_dataset_adults_s7_sensitive_primary
  • process_dataset_infants_s7_sensitive_primary
  • describe_dataset_infants_s7_sensitive_primary
  • generate_dataset_adults_s5_specific_secondary
  • process_cohort_adults_s5_specific_secondary
  • describe_cohort_adults_s5
  • generate_dataset_adults_s6_specific_secondary
  • process_cohort_adults_s6_specific_secondary
  • describe_cohort_adults_s6
  • process_cohort_infants_s7_specific_secondary
  • describe_cohort_infants_s7
  • process_dataset_older_adults_s2_specific_secondary
  • describe_dataset_older_adults_s2_specific_secondary
  • process_dataset_older_adults_s3_specific_secondary
  • describe_dataset_older_adults_s3_specific_secondary
  • process_dataset_older_adults_s5_specific_secondary
  • describe_dataset_older_adults_s5_specific_secondary
  • process_dataset_adults_s2_specific_secondary
  • describe_dataset_adults_s2_specific_secondary
  • process_dataset_adults_s3_specific_secondary
  • describe_dataset_adults_s3_specific_secondary
  • process_dataset_adults_s5_specific_secondary
  • describe_dataset_adults_s5_specific_secondary
  • process_dataset_children_and_adolescents_s2_specific_secondary
  • describe_dataset_children_and_adolescents_s2_specific_secondary
  • process_dataset_children_and_adolescents_s3_specific_secondary
  • describe_dataset_children_and_adolescents_s3_specific_secondary
  • process_dataset_children_and_adolescents_s5_specific_secondary
  • describe_dataset_children_and_adolescents_s5_specific_secondary
  • process_dataset_infants_s2_specific_secondary
  • describe_dataset_infants_s2_specific_secondary
  • process_dataset_infants_s3_specific_secondary
  • describe_dataset_infants_s3_specific_secondary
  • process_dataset_infants_s5_specific_secondary
  • describe_dataset_infants_s5_specific_secondary
  • phenotype_sensitivity_older_adults_s1
  • phenotype_sensitivity_older_adults_s2
  • phenotype_sensitivity_older_adults_s3
  • phenotype_sensitivity_older_adults_s4
  • phenotype_sensitivity_older_adults_s5
  • phenotype_sensitivity_older_adults_s6
  • phenotype_sensitivity_older_adults_s7
  • phenotype_sensitivity_adults_s1
  • phenotype_sensitivity_adults_s2
  • phenotype_sensitivity_adults_s3
  • phenotype_sensitivity_adults_s4
  • phenotype_sensitivity_adults_s5
  • phenotype_sensitivity_adults_s6
  • phenotype_sensitivity_adults_s7
  • phenotype_sensitivity_children_and_adolescents_s1
  • phenotype_sensitivity_children_and_adolescents_s2
  • phenotype_sensitivity_children_and_adolescents_s3
  • phenotype_sensitivity_children_and_adolescents_s4
  • phenotype_sensitivity_children_and_adolescents_s5
  • phenotype_sensitivity_children_and_adolescents_s6
  • phenotype_sensitivity_children_and_adolescents_s7
  • phenotype_sensitivity_infants_s1
  • phenotype_sensitivity_infants_s2
  • phenotype_sensitivity_infants_s3
  • phenotype_sensitivity_infants_s4
  • phenotype_sensitivity_infants_s5
  • phenotype_sensitivity_infants_s6
  • phenotype_sensitivity_infants_s7
  • collate_table1_tables_older_adults
  • collate_rates_tables_specific_primary_older_adults
  • collate_rates_tables_sensitive_primary_older_adults
  • collate_phenotype_sensitivity_tables_older_adults
  • collate_table1_tables_adults
  • collate_rates_tables_specific_primary_adults
  • collate_rates_tables_sensitive_primary_adults
  • collate_phenotype_sensitivity_tables_adults
  • collate_table1_tables_children_and_adolescents
  • collate_rates_tables_specific_primary_children_and_adolescents
  • collate_rates_tables_sensitive_primary_children_and_adolescents
  • collate_phenotype_sensitivity_tables_children_and_adolescents
  • collate_table1_tables_infants
  • collate_rates_tables_specific_primary_infants
  • collate_rates_tables_sensitive_primary_infants
  • collate_phenotype_sensitivity_tables_infants

Code comparison

Compare the code used in this job request