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Job request: 23720

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
disparities-comparison-rsv-flu-c19
ID:
vhzahei6fykildjv
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Em Prestige requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_dataset_adults_s1_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    jc4skwsfcozkpc3h
  • Action:
    generate_dataset_adults_s1_specific_primary
    Status:
    Succeeded
    Job identifier:
    jjfu6swtoqxjeinf
  • Action:
    generate_dataset_adults_s1_specific_secondary
    Status:
    Succeeded
    Job identifier:
    4fmnqqhriettifxx
  • Action:
    generate_dataset_adults_s2_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    7fj5dvcdzyhw46xn
  • Action:
    generate_dataset_adults_s2_specific_primary
    Status:
    Succeeded
    Job identifier:
    cu45hyst4iqx2i5z
  • Action:
    generate_dataset_adults_s2_specific_secondary
    Status:
    Succeeded
    Job identifier:
    oczcvkwstegk664q
  • Action:
    generate_dataset_adults_s3_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    q3ha7aogcjmgpyvn
  • Action:
    process_dataset_adults_s1_specific_primary
    Status:
    Succeeded
    Job identifier:
    mn4zmweh53a23l5n
  • Action:
    multiple_outcomes_adults_s1
    Status:
    Succeeded
    Job identifier:
    dvjdwovf6hhkmn6j
  • Action:
    generate_dataset_adults_s3_specific_primary
    Status:
    Succeeded
    Job identifier:
    7pkqdnwujtzzthdi
  • Action:
    process_dataset_adults_s2_specific_primary
    Status:
    Succeeded
    Job identifier:
    654kuan2qgrc2ztl
  • Action:
    multiple_outcomes_adults_s2
    Status:
    Succeeded
    Job identifier:
    zmjlcomcmxi2nid4
  • Action:
    generate_dataset_adults_s3_specific_secondary
    Status:
    Succeeded
    Job identifier:
    nfmorxguq3e6rebn
  • Action:
    process_dataset_adults_s3_specific_primary
    Status:
    Succeeded
    Job identifier:
    pq6n2cg3om6mv4e6
  • Action:
    multiple_outcomes_adults_s3
    Status:
    Succeeded
    Job identifier:
    ihtfttwgabz5f2cz
  • Action:
    generate_dataset_adults_s4_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    4dag7rlp5bx3zvfu
  • Action:
    process_cohort_adults_s1_specific_secondary
    Status:
    Succeeded
    Job identifier:
    e33vr3nra5hqhl5l
  • Action:
    describe_cohort_adults_s1
    Status:
    Succeeded
    Job identifier:
    57brsqsdw2ahbw2c
  • Action:
    generate_dataset_adults_s4_specific_primary
    Status:
    Succeeded
    Job identifier:
    gguccbtgpfksorlu
  • Action:
    process_cohort_adults_s2_specific_secondary
    Status:
    Succeeded
    Job identifier:
    uwo3dfifsccup4uu
  • Action:
    generate_dataset_adults_s4_specific_secondary
    Status:
    Succeeded
    Job identifier:
    vgwjlt5mumkq5mmo
  • Action:
    describe_cohort_adults_s2
    Status:
    Succeeded
    Job identifier:
    ipl47dij4cedsval
  • Action:
    process_dataset_adults_s2_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    dx3leh5w5pcstea6
  • Action:
    phenotype_sensitivity_adults_s2
    Status:
    Succeeded
    Job identifier:
    6rb2ryytpybsdao2
  • Action:
    generate_dataset_adults_s5_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    serfmtdyebrfth37
  • Action:
    process_dataset_adults_s4_specific_primary
    Status:
    Succeeded
    Job identifier:
    cqiy2hdy2hs6xgdi
  • Action:
    multiple_outcomes_adults_s4
    Status:
    Succeeded
    Job identifier:
    2kirav56mw5d2744
  • Action:
    generate_dataset_adults_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    kgtax57vfh5yy2di
  • Action:
    process_cohort_adults_s3_specific_secondary
    Status:
    Succeeded
    Job identifier:
    uauqyrpjl7l55d3f
  • Action:
    describe_cohort_adults_s3
    Status:
    Succeeded
    Job identifier:
    xs3sanchj53t3z2z
  • Action:
    generate_dataset_adults_s5_specific_secondary
    Status:
    Succeeded
    Job identifier:
    5mqf2ahct3rahegq
  • Action:
    process_cohort_adults_s4_specific_secondary
    Status:
    Succeeded
    Job identifier:
    bxvmm2shzv4iffnt
  • Action:
    describe_cohort_adults_s4
    Status:
    Succeeded
    Job identifier:
    mbwv5q775ea5vjq3
  • Action:
    generate_dataset_adults_s6_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    fqrixvxjjnbicv3b
  • Action:
    process_dataset_adults_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    zdfzvwmpqbvyztct
  • Action:
    multiple_outcomes_adults_s5
    Status:
    Succeeded
    Job identifier:
    hm3ejqlylzpdhtes
  • Action:
    generate_dataset_adults_s6_specific_primary
    Status:
    Succeeded
    Job identifier:
    tpzr7m5uoefie5s7
  • Action:
    process_dataset_adults_s4_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    tn7xwyzkhpyh4ogv
  • Action:
    phenotype_sensitivity_adults_s4
    Status:
    Succeeded
    Job identifier:
    kacdkmbr3dfee3jn
  • Action:
    generate_dataset_adults_s6_specific_secondary
    Status:
    Succeeded
    Job identifier:
    b7efvevk5xonsrnq
  • Action:
    generate_dataset_adults_s7_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    irqyt62lvjoenygt
  • Action:
    process_cohort_adults_s5_specific_secondary
    Status:
    Succeeded
    Job identifier:
    n4j5zepta7pajaaj
  • Action:
    process_dataset_adults_s6_specific_primary
    Status:
    Succeeded
    Job identifier:
    jo6zcj2lajns4eoc
  • Action:
    describe_cohort_adults_s5
    Status:
    Succeeded
    Job identifier:
    4gliwkricneozwbc
  • Action:
    multiple_outcomes_adults_s6
    Status:
    Succeeded
    Job identifier:
    df2icza2z5iog4c6
  • Action:
    generate_dataset_adults_s7_specific_primary
    Status:
    Succeeded
    Job identifier:
    qxp5ezfopqqcdq7q
  • Action:
    process_cohort_adults_s6_specific_secondary
    Status:
    Succeeded
    Job identifier:
    mstc2lz2vlicv5ct
  • Action:
    describe_cohort_adults_s6
    Status:
    Succeeded
    Job identifier:
    yfxlqnyg5cz4qke5
  • Action:
    generate_dataset_adults_s7_specific_secondary
    Status:
    Succeeded
    Job identifier:
    b6gc4q7rbx5sdbtf
  • Action:
    process_dataset_adults_s7_specific_primary
    Status:
    Succeeded
    Job identifier:
    joi7f2wgvlvwlm3s
  • Action:
    multiple_outcomes_adults_s7
    Status:
    Succeeded
    Job identifier:
    onap6griecztsup3
  • Action:
    collate_multiple_outcomes_tables_adults
    Status:
    Succeeded
    Job identifier:
    pvqkvtktjlvkgaxa
  • Action:
    generate_flow_chart_data_adults_s1
    Status:
    Succeeded
    Job identifier:
    sx5g237ps2syzmai
  • Action:
    process_cohort_adults_s7_specific_secondary
    Status:
    Succeeded
    Job identifier:
    ydzzl3m2jwymlo2a
  • Action:
    generate_flow_chart_data_adults_s2
    Status:
    Succeeded
    Job identifier:
    waykbrivvgxyltrl
  • Action:
    describe_cohort_adults_s7
    Status:
    Succeeded
    Job identifier:
    mv2mbo5ohwdf5464
  • Action:
    process_flow_chart_data_adults_s1
    Status:
    Succeeded
    Job identifier:
    34jxmtewbuevbhh3
  • Action:
    generate_flow_chart_data_adults_s3
    Status:
    Succeeded
    Job identifier:
    rja5rndqips5mvob
  • Action:
    collate_table1_tables_adults
    Status:
    Failed
    Job identifier:
    sxk4ls4peac6w6b7
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    process_flow_chart_data_adults_s2
    Status:
    Succeeded
    Job identifier:
    i24awi2dke44zmei
  • Action:
    generate_flow_chart_data_adults_s4
    Status:
    Succeeded
    Job identifier:
    ooxtzrnelxdwjxao
  • Action:
    process_flow_chart_data_adults_s3
    Status:
    Succeeded
    Job identifier:
    vgvovgi6mfzn3yyw
  • Action:
    generate_flow_chart_data_adults_s5
    Status:
    Succeeded
    Job identifier:
    hhs6td3pkhl7bdpj
  • Action:
    process_flow_chart_data_adults_s4
    Status:
    Succeeded
    Job identifier:
    2mo6zd6nxppnlrl7
  • Action:
    generate_flow_chart_data_adults_s6
    Status:
    Succeeded
    Job identifier:
    x36le7c77pd7kwp4
  • Action:
    process_dataset_adults_s6_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    kxvlfrlnimscuf46
  • Action:
    generate_flow_chart_data_adults_s7
    Status:
    Succeeded
    Job identifier:
    ehbhhvfv3tmdgsby
  • Action:
    phenotype_sensitivity_adults_s6
    Status:
    Succeeded
    Job identifier:
    q2hghol63jo3w7vm
  • Action:
    process_flow_chart_data_adults_s5
    Status:
    Succeeded
    Job identifier:
    odg26x267ewjkhy4
  • Action:
    process_flow_chart_data_adults_s6
    Status:
    Succeeded
    Job identifier:
    ts6swigzg5ncnvw4
  • Action:
    process_dataset_adults_s5_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    vson72m3oaqvfqno
  • Action:
    process_flow_chart_data_adults_s7
    Status:
    Succeeded
    Job identifier:
    sog3jdnzhfeavj5i
  • Action:
    collate_flow_chart_tables_adults
    Status:
    Succeeded
    Job identifier:
    wba2dfhpd2qeebb2
  • Action:
    phenotype_sensitivity_adults_s5
    Status:
    Succeeded
    Job identifier:
    dq53igrvr4o36auj
  • Action:
    process_dataset_adults_s7_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    2aufgtxip6y3eq7h
  • Action:
    phenotype_sensitivity_adults_s7
    Status:
    Succeeded
    Job identifier:
    li3kglnjlv5l4v4w
  • Action:
    process_dataset_adults_s1_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    sndjml5z2awgflyr
  • Action:
    phenotype_sensitivity_adults_s1
    Status:
    Succeeded
    Job identifier:
    n76vcgqcqr5z6hfa
  • Action:
    process_dataset_adults_s3_sensitive_primary
    Status:
    Succeeded
    Job identifier:
    2diqkq5ynrrva6gq
  • Action:
    phenotype_sensitivity_adults_s3
    Status:
    Succeeded
    Job identifier:
    d5g3mt7i6cagnucm
  • Action:
    collate_phenotype_sensitivity_tables_adults
    Status:
    Succeeded
    Job identifier:
    5wgczvggssbh4k6p

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 85:37:24

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
disparities-comparison-rsv-flu-c19
Requested by
Em Prestige
Branch
main
Force run dependencies
Yes
Git commit hash
f21f173
Requested actions
  • collate_flow_chart_tables_adults
  • collate_table1_tables_adults
  • collate_phenotype_sensitivity_tables_adults
  • collate_multiple_outcomes_tables_adults

Code comparison

Compare the code used in this job request