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Job request: 24316

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
disparities-comparison-rsv-flu-c19
ID:
r5z27f6l43botkqe
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Em Prestige requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    analyse_dataset_children_and_adolescents_flu_further_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    7l3lnp4qtunhtu2q
  • Action:
    analyse_dataset_children_and_adolescents_flu_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    gfyjprfcfn4c2rxh
  • Action:
    analyse_dataset_older_adults_flu_further_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    nczcywvcimoj2w2d
  • Action:
    analyse_dataset_older_adults_flu_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    kahcmxzu5imo3vfe
  • Action:
    analyse_dataset_older_adults_rsv_further_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    f3ezk7sgfqq56ufi
  • Action:
    analyse_dataset_older_adults_rsv_s5_specific_primary
    Status:
    Succeeded
    Job identifier:
    2a27ufwmr6l7bgap
  • Action:
    collate_covid_model_outputs_tables_adults
    Status:
    Failed
    Job identifier:
    qzmktptmh5ywjqyc
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_covid_model_outputs_tables_children_and_adolescents
    Status:
    Failed
    Job identifier:
    b4zrbls54aahovo7
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_covid_model_outputs_tables_older_adults
    Status:
    Failed
    Job identifier:
    gsylhzk7rcur7fpc
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_flu_model_outputs_tables_adults
    Status:
    Succeeded
    Job identifier:
    a3ptmi6a25dn2i55
  • Action:
    collate_further_covid_model_outputs_tables_adults
    Status:
    Failed
    Job identifier:
    rhtq2uwxbcpbs2tr
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_further_covid_model_outputs_tables_children_and_adolescents
    Status:
    Failed
    Job identifier:
    ef6s7y3brzec46rl
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_further_covid_model_outputs_tables_older_adults
    Status:
    Failed
    Job identifier:
    gkxov6tdjdw33bpt
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_further_overall_and_all_cause_model_outputs_tables_adults
    Status:
    Failed
    Job identifier:
    kgzva5tgmkintn6k
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/collated/analytic/adults_further_overall_and_all_cause_model_outputs_collated.csv
  • Action:
    collate_further_overall_and_all_cause_model_outputs_tables_older_adults
    Status:
    Failed
    Job identifier:
    s34orkomh7uagokp
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/collated/analytic/older_adults_further_overall_and_all_cause_model_outputs_collated.csv
  • Action:
    collate_further_rsv_model_outputs_tables_adults_sensitivity
    Status:
    Failed
    Job identifier:
    cpb5x7rctqivmprg
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_further_overall_and_all_cause_model_outputs_tables_children_and_adolescents
    Status:
    Failed
    Job identifier:
    kgrhbuzovw7mhpmt
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/collated/analytic/children_and_adolescents_further_overall_and_all_cause_model_outputs_collated.csv
  • Action:
    collate_further_rsv_model_outputs_tables_children_and_adolescents_sensitivity
    Status:
    Failed
    Job identifier:
    qk7ebc6u3ifa6ew2
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_rsv_model_outputs_tables_older_adults
    Status:
    Succeeded
    Job identifier:
    gckfhbjmoi335woa
  • Action:
    collate_flu_model_outputs_tables_children_and_adolescents
    Status:
    Succeeded
    Job identifier:
    m5ricfvbfujmshma
  • Action:
    collate_flu_model_outputs_tables_older_adults
    Status:
    Succeeded
    Job identifier:
    ftlwcxdg3sobbmkc
  • Action:
    collate_further_rsv_model_outputs_tables_older_adults
    Status:
    Failed
    Job identifier:
    c3jvj4bv4iu22gwq
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    collate_further_flu_model_outputs_tables_children_and_adolescents
    Status:
    Failed
    Job identifier:
    af5bz6lcm7c3jelp
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    collate_further_flu_model_outputs_tables_adults
    Status:
    Failed
    Job identifier:
    6twlc33zve5cqocy
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    collate_further_flu_model_outputs_tables_older_adults
    Status:
    Failed
    Job identifier:
    x5tdea7atrhudmwn
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 35:33:33

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
disparities-comparison-rsv-flu-c19
Requested by
Em Prestige
Branch
main
Force run dependencies
No
Git commit hash
32b3924
Requested actions
  • analyse_dataset_older_adults_rsv_s5_specific_primary
  • analyse_dataset_older_adults_rsv_further_s5_specific_primary
  • analyse_dataset_older_adults_flu_s5_specific_primary
  • analyse_dataset_older_adults_flu_further_s5_specific_primary
  • analyse_dataset_children_and_adolescents_flu_s5_specific_primary
  • analyse_dataset_children_and_adolescents_flu_further_s5_specific_primary
  • collate_rsv_model_outputs_tables_older_adults
  • collate_further_rsv_model_outputs_tables_older_adults
  • collate_flu_model_outputs_tables_older_adults
  • collate_further_flu_model_outputs_tables_older_adults
  • collate_covid_model_outputs_tables_older_adults
  • collate_further_covid_model_outputs_tables_older_adults
  • collate_further_overall_and_all_cause_model_outputs_tables_older_adults
  • collate_flu_model_outputs_tables_adults
  • collate_further_flu_model_outputs_tables_adults
  • collate_covid_model_outputs_tables_adults
  • collate_further_covid_model_outputs_tables_adults
  • collate_further_overall_and_all_cause_model_outputs_tables_adults
  • collate_further_rsv_model_outputs_tables_adults_sensitivity
  • collate_flu_model_outputs_tables_children_and_adolescents
  • collate_further_flu_model_outputs_tables_children_and_adolescents
  • collate_covid_model_outputs_tables_children_and_adolescents
  • collate_further_covid_model_outputs_tables_children_and_adolescents
  • collate_further_overall_and_all_cause_model_outputs_tables_children_and_adolescents
  • collate_further_rsv_model_outputs_tables_children_and_adolescents_sensitivity

Code comparison

Compare the code used in this job request