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Job request: 26652

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
disparities-comparison-rsv-flu-c19
ID:
k4y5fwymmhsahdds
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Em Prestige requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    phenotype_testing_generate_dataset_adults_s8_alternative_additional_sensitivity
    Status:
    Succeeded
    Job identifier:
    qlzoibooiaxdsosl
  • Action:
    phenotype_testing_generate_dataset_adults_s8_second_alternative_additional_sensitivity
    Status:
    Running
    Job identifier:
    tjteax6axibzfe55
  • Action:
    phenotype_testing_generate_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
    Status:
    Running
    Job identifier:
    zvu2m4ssb3utfajp
  • Action:
    phenotype_testing_process_dataset_adults_s8_alternative_additional_sensitivity
    Status:
    Succeeded
    Job identifier:
    lqo7esndx5uhxuz2
  • Action:
    phenotype_testing_skim_dataset_adults_s8_alternative_additional_sensitivity
    Status:
    Succeeded
    Job identifier:
    dpwxjzwae4ppb3a3
  • Action:
    phenotype_testing_phenotype_sensitivity_adults_s8_alternative
    Status:
    Running
    Job identifier:
    ikak4zkk4ff3i72i
  • Action:
    phenotype_testing_reinfections_adults_s8_alternative
    Status:
    Succeeded
    Job identifier:
    uzmsri5xc477si55
  • Action:
    phenotype_testing_skim_processed_dataset_adults_s8_alternative_additional_sensitivity
    Status:
    Running
    Job identifier:
    q6imv6xjlxaoksa3
  • Action:
    phenotype_testing_skim_processed_dataset_older_adults_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    6vfay2metiksgm3e
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_processed_dataset_older_adults_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    vm6r6ro6jmubi3qm
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_changes_infants_s8_alternative
    Status:
    Pending
    Job identifier:
    djgp475ozvdwfbdj
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_reinfections_infants_s8_alternative
    Status:
    Pending
    Job identifier:
    2twheruvohkrfsmh
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_changes_children_and_adolescents_s8_alternative
    Status:
    Pending
    Job identifier:
    pfakw6uyet5er7rn
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_processed_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    4ubxfsgvov56fetq
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_changes_infants_s8_second_alternative
    Status:
    Pending
    Job identifier:
    hkudbldoevstc6hn
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_dataset_older_adults_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    ceebreviofodh5nv
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_processed_dataset_adults_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    3bz4gj37wqhjf46y
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_processed_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    x4j2pinivmfybkce
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_dataset_older_adults_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    2dlvm7swzsjwuzd6
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_dataset_infants_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    eax7poogdtcv4y7w
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_changes_children_and_adolescents_s8_second_alternative
    Status:
    Pending
    Job identifier:
    ogcznw4kxnuct4bn
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_changes_older_adults_s8_alternative
    Status:
    Pending
    Job identifier:
    pobiuvsnutji64c2
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    ayl2a2da5telp62j
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    qmqgsa242ebcfusp
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_dataset_infants_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    cchvglsxuhx7nsbr
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_changes_older_adults_s8_second_alternative
    Status:
    Pending
    Job identifier:
    sjunugsiqkvqx5kw
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_reinfections_older_adults_s8_second_alternative
    Status:
    Pending
    Job identifier:
    pxggt2buqwwn23or
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_reinfections_older_adults_s8_alternative
    Status:
    Pending
    Job identifier:
    3rr4ndxoaqdidval
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_reinfections_children_and_adolescents_s8_alternative
    Status:
    Pending
    Job identifier:
    xfsfpjgoowhnyp5s
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_reinfections_children_and_adolescents_s8_second_alternative
    Status:
    Pending
    Job identifier:
    c6cia42i34kjb44a
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_process_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    twj5vgnecd5hg4nj
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_process_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    ee5ypuir3wggzpwm
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_process_dataset_infants_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    rk6gxy4m5x6izkdg
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_process_dataset_infants_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    6plhkjujnrao4kie
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_reinfections_infants_s8_second_alternative
    Status:
    Pending
    Job identifier:
    akcpc7lpf7ei6ott
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_phenotype_sensitivity_infants_s8_alternative
    Status:
    Pending
    Job identifier:
    cckoyhiowmxavqcf
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_phenotype_sensitivity_infants_s8_second_alternative
    Status:
    Pending
    Job identifier:
    nrx3pevqw7tpnff2
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_phenotype_sensitivity_older_adults_s8_alternative
    Status:
    Pending
    Job identifier:
    ti5pogk4r2c7f3rf
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_process_dataset_adults_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    2ahlqtzvpa7ni5bi
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_dataset_adults_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    frxrkjuzijbdfdat
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_phenotype_sensitivity_children_and_adolescents_s8_alternative
    Status:
    Pending
    Job identifier:
    3mq5ejlelqxroadl
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_phenotype_sensitivity_children_and_adolescents_s8_second_alternative
    Status:
    Pending
    Job identifier:
    raxc6pmxlorfthxa
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_generate_dataset_older_adults_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    xalhezoyhfjwrszw
    Status message:
    waiting_on_db_workers: Waiting on available database workers
  • Action:
    phenotype_testing_phenotype_sensitivity_adults_s8_second_alternative
    Status:
    Pending
    Job identifier:
    mvkuxefhspsm2t3g
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_generate_dataset_infants_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    3j2ivhibnmeaiodz
    Status message:
    waiting_on_db_workers: Waiting on available database workers
  • Action:
    phenotype_testing_generate_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    hg65cqvrc3dldezb
    Status message:
    waiting_on_db_workers: Waiting on available database workers
  • Action:
    phenotype_testing_generate_dataset_infants_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    6kcnv5bifw6jkskm
    Status message:
    waiting_on_db_workers: Waiting on available database workers
  • Action:
    phenotype_testing_changes_adults_s8_alternative
    Status:
    Pending
    Job identifier:
    5kn4rveegds3zc4t
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_generate_dataset_older_adults_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    5koj7vphctuafshh
    Status message:
    waiting_on_db_workers: Waiting on available database workers
  • Action:
    phenotype_testing_changes_adults_s8_second_alternative
    Status:
    Pending
    Job identifier:
    uzxrkyp5weimgni6
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_phenotype_sensitivity_older_adults_s8_second_alternative
    Status:
    Pending
    Job identifier:
    5ediuho5v4qpxzgm
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_process_dataset_older_adults_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    okpnt6jx5ckwbano
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_process_dataset_older_adults_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    x6zphvpnyyg7iqzr
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_reinfections_adults_s8_second_alternative
    Status:
    Pending
    Job identifier:
    b3ks26g7rlaukjc2
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_processed_dataset_infants_s8_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    nzjzr44tqqoojfes
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    phenotype_testing_skim_processed_dataset_infants_s8_second_alternative_additional_sensitivity
    Status:
    Pending
    Job identifier:
    zswcqqz2qb3wm53n
    Status message:
    waiting_on_dependencies: Waiting on dependencies

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Job statistics

Status Count Percentage
Pending 48 85.7%
Running 4 7.1%
Succeeded 4 7.1%
Failed 0 0%

4 / 56 (7.1%) complete

Timeline

  • Created:

  • Started:

  • Runtime: 02:35:56

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Running
Backend
TPP
Workspace
disparities-comparison-rsv-flu-c19
Requested by
Em Prestige
Branch
main
Force run dependencies
No
Git commit hash
fad246d
Requested actions
  • phenotype_testing_generate_dataset_older_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_older_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_older_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_older_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_older_adults_s8_alternative
  • phenotype_testing_reinfections_older_adults_s8_alternative
  • phenotype_testing_changes_older_adults_s8_alternative
  • phenotype_testing_generate_dataset_older_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_older_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_older_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_older_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_older_adults_s8_second_alternative
  • phenotype_testing_reinfections_older_adults_s8_second_alternative
  • phenotype_testing_changes_older_adults_s8_second_alternative
  • phenotype_testing_generate_dataset_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_adults_s8_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_adults_s8_alternative
  • phenotype_testing_reinfections_adults_s8_alternative
  • phenotype_testing_changes_adults_s8_alternative
  • phenotype_testing_generate_dataset_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_adults_s8_second_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_adults_s8_second_alternative
  • phenotype_testing_reinfections_adults_s8_second_alternative
  • phenotype_testing_changes_adults_s8_second_alternative
  • phenotype_testing_generate_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_children_and_adolescents_s8_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_children_and_adolescents_s8_alternative
  • phenotype_testing_reinfections_children_and_adolescents_s8_alternative
  • phenotype_testing_changes_children_and_adolescents_s8_alternative
  • phenotype_testing_generate_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_children_and_adolescents_s8_second_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_children_and_adolescents_s8_second_alternative
  • phenotype_testing_reinfections_children_and_adolescents_s8_second_alternative
  • phenotype_testing_changes_children_and_adolescents_s8_second_alternative
  • phenotype_testing_generate_dataset_infants_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_infants_s8_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_infants_s8_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_infants_s8_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_infants_s8_alternative
  • phenotype_testing_reinfections_infants_s8_alternative
  • phenotype_testing_changes_infants_s8_alternative
  • phenotype_testing_generate_dataset_infants_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_dataset_infants_s8_second_alternative_additional_sensitivity
  • phenotype_testing_process_dataset_infants_s8_second_alternative_additional_sensitivity
  • phenotype_testing_skim_processed_dataset_infants_s8_second_alternative_additional_sensitivity
  • phenotype_testing_phenotype_sensitivity_infants_s8_second_alternative
  • phenotype_testing_reinfections_infants_s8_second_alternative
  • phenotype_testing_changes_infants_s8_second_alternative

Code comparison

Compare the code used in this job request