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Job request: 10293

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
covid-collateral
ID:
qdaqtw67defres3d

This page shows the technical details of what happened when the authorised researcher Ruth Costello requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    cox_models_mi
    Status:
    Status: Failed
    Job identifier:
    7iyvwpb7dzas5esj
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_pre
    Status:
    Status: Failed
    Job identifier:
    6dqjk3a6awtnldrt
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_t2dm
    Status:
    Status: Failed
    Job identifier:
    gjzwp23fksn7m4c4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_easing1
    Status:
    Status: Failed
    Job identifier:
    lnwamshpp6dwflg4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_dm_keto
    Status:
    Status: Failed
    Job identifier:
    ydtjrvdd3xat3y7b
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_smi
    Status:
    Status: Failed
    Job identifier:
    v6nq3txhpohoj6rj
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_stroke
    Status:
    Status: Failed
    Job identifier:
    5ykiqrrkhlckcuto
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_vte
    Status:
    Status: Failed
    Job identifier:
    3e6hz7g4ufjla66i
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_resp
    Status:
    Status: Failed
    Job identifier:
    c5tzs4lyquyzsyjk
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_easing2
    Status:
    Status: Failed
    Job identifier:
    vl62mutp3xlq7ivw
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_easing3
    Status:
    Status: Failed
    Job identifier:
    ymtnydqau6rnemdk
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_heart_failure
    Status:
    Status: Failed
    Job identifier:
    s73vnaqmcmt4hzjw
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_mh
    Status:
    Status: Failed
    Job identifier:
    bybvzlpj2bqwx3cr
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_t1dm
    Status:
    Status: Failed
    Job identifier:
    g22lzgkzlfumdtg7
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_static
    Status:
    Status: Failed
    Job identifier:
    r7p7knfwe63znnub
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    calculate_measures_resp
    Status:
    Status: Failed
    Job identifier:
    2nptzqjmwlk2iu37
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_copd
    Status:
    Status: Failed
    Job identifier:
    a5ehe5klnyhradom
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    calculate_measures_mh
    Status:
    Status: Failed
    Job identifier:
    oxjgwwdab3oltu7e
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_model_prep
    Status:
    Status: Failed
    Job identifier:
    jhe4sabf5jqo36gb
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_anx
    Status:
    Status: Failed
    Job identifier:
    v5r2hmhbhwx6o4vo
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_cvd
    Status:
    Status: Failed
    Job identifier:
    xy7bqchfxnxco6p2
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_dm
    Status:
    Status: Failed
    Job identifier:
    6bec2c2tasvtat4l
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_mh
    Status:
    Status: Failed
    Job identifier:
    giynvehyaedwrovw
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_wave2
    Status:
    Status: Failed
    Job identifier:
    xdkniqx7zlewbbam
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    graphs_dm
    Status:
    Status: Failed
    Job identifier:
    z4ynwp6jm2rdjypf
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    graphs_mh_cvd
    Status:
    Status: Failed
    Job identifier:
    ckdxcy3ymukesiyw
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    graphs_resp
    Status:
    Status: Failed
    Job identifier:
    3rdis4dwvulviq76
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    join_cohorts_mh
    Status:
    Status: Failed
    Job identifier:
    umemflclmxtygsll
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_data_check
    Status:
    Status: Failed
    Job identifier:
    l4pvtfrdciwtgvui
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    calculate_measures_dm
    Status:
    Status: Failed
    Job identifier:
    lqyrcwga6sawojqo
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_asthma
    Status:
    Status: Failed
    Job identifier:
    b3yrsykzyeisyytv
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_depress
    Status:
    Status: Failed
    Job identifier:
    xokouiwzovinbuur
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_dm
    Status:
    Status: Failed
    Job identifier:
    ns2aliulgvegp2v6
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_pandemic
    Status:
    Status: Failed
    Job identifier:
    sacgb5jvzdnr6u6g
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_wave1
    Status:
    Status: Failed
    Job identifier:
    5gidnartmrhyw7ef
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    generate_study_population_survival_wave3
    Status:
    Status: Failed
    Job identifier:
    zfvffk2elgunfhvt
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Finished:

  • Runtime:

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-collateral
Requested by
Ruth Costello
Branch
main
Force run dependencies
No
Git commit hash
00ed8f8
Requested actions
  • generate_study_population_static
  • generate_study_population_mh
  • join_cohorts_mh
  • generate_study_population_dm
  • generate_study_population_resp
  • calculate_measures_mh
  • calculate_measures_dm
  • calculate_measures_resp
  • graphs_mh_cvd
  • graphs_dm
  • graphs_resp
  • generate_study_population_survival_pre
  • generate_study_population_survival_pandemic
  • generate_study_population_survival_wave1
  • generate_study_population_survival_easing1
  • generate_study_population_survival_wave2
  • generate_study_population_survival_easing2
  • generate_study_population_survival_wave3
  • generate_study_population_survival_easing3
  • cox_model_prep
  • cox_data_check
  • cox_models_cvd
  • cox_models_mi
  • cox_models_stroke
  • cox_models_heart_failure
  • cox_models_vte
  • cox_models_t1dm
  • cox_models_t2dm
  • cox_models_dm_keto
  • cox_models_dm
  • cox_models_asthma
  • cox_models_copd
  • cox_models_depress
  • cox_models_anx
  • cox_models_smi
  • cox_models_mh

Code comparison

Compare the code used in this job request