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Job request: 10313

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
covid-collateral
ID:
5lzhcyraz7aj5u7t
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Ruth Costello requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_study_population_survival_easing3
    Status:
    Succeeded
    Job identifier:
    g7hicvphbnsrtfpl
  • Action:
    generate_study_population_tables_2019
    Status:
    Succeeded
    Job identifier:
    tq2w6s5wpcld3sx4
  • Action:
    generate_study_population_survival_pandemic
    Status:
    Succeeded
    Job identifier:
    xgy5lby7fx3r5tgp
  • Action:
    generate_study_population_dm
    Status:
    Succeeded
    Job identifier:
    jpabnj435ds4pu2g
  • Action:
    generate_study_population_mh
    Status:
    Succeeded
    Job identifier:
    2b766dcjefapaclq
  • Action:
    generate_study_population_survival_easing2
    Status:
    Succeeded
    Job identifier:
    6gxdxdwk3hlvmsqf
  • Action:
    generate_study_population_static
    Status:
    Succeeded
    Job identifier:
    ydgtw3l3vsixpkap
  • Action:
    generate_study_population
    Status:
    Succeeded
    Job identifier:
    arbhl4mxtdztum2b
  • Action:
    generate_study_population_tables_2021
    Status:
    Succeeded
    Job identifier:
    znv5rqrgvjuh2qmj
  • Action:
    generate_study_population_survival_pre
    Status:
    Succeeded
    Job identifier:
    s7udldawrgtjd46w
  • Action:
    generate_study_population_survival_wave3
    Status:
    Succeeded
    Job identifier:
    nyai5dkoctdovovr
  • Action:
    generate_study_population_survival_wave1
    Status:
    Succeeded
    Job identifier:
    qkhi3aonosvo2s35
  • Action:
    generate_study_population_resp
    Status:
    Succeeded
    Job identifier:
    cscm33vespgtjhfz
  • Action:
    generate_study_population_survival_wave2
    Status:
    Succeeded
    Job identifier:
    myk4ru2c4v65upfp
  • Action:
    generate_study_population_survival_easing1
    Status:
    Succeeded
    Job identifier:
    yrgoeqlev333vlqt
  • Action:
    generate_study_population_tables_2020
    Status:
    Succeeded
    Job identifier:
    6kjymrrhtxlx6666
  • Action:
    create_baseline_tables
    Status:
    Succeeded
    Job identifier:
    wcsn4ukamlf2kqbd
  • Action:
    cox_model_prep
    Status:
    Succeeded
    Job identifier:
    fbvgrunh5m53urdv
  • Action:
    join_cohorts_cvd
    Status:
    Succeeded
    Job identifier:
    gg5mojgte5ii5s3x
  • Action:
    calculate_measures
    Status:
    Succeeded
    Job identifier:
    wz63dypmumuprerz
  • Action:
    time_series_cvd
    Status:
    Succeeded
    Job identifier:
    lcxalgtyx4bt5amr
  • Action:
    model_checks_cvd
    Status:
    Succeeded
    Job identifier:
    dzf6zr33db56pps2
  • Action:
    join_cohorts_mh
    Status:
    Succeeded
    Job identifier:
    d3ijqwljk2krngpw
  • Action:
    calculate_measures_mh
    Status:
    Succeeded
    Job identifier:
    u7loi3y7yfjgpxlz
  • Action:
    time_series_mh
    Status:
    Succeeded
    Job identifier:
    jq75jioditn27bsj
  • Action:
    graphs_mh_cvd
    Status:
    Succeeded
    Job identifier:
    bhss2i2b4zub6co5
  • Action:
    model_checks_mh
    Status:
    Succeeded
    Job identifier:
    rnvhr3xfszvodskg
  • Action:
    calculate_measures_resp
    Status:
    Succeeded
    Job identifier:
    amiqpg3dbfzsfvsk
  • Action:
    graphs_resp
    Status:
    Succeeded
    Job identifier:
    m3avawmfnbxh4wgw
  • Action:
    time_series_resp
    Status:
    Succeeded
    Job identifier:
    xhyusw4dou6zex3v
  • Action:
    model_checks_resp
    Status:
    Succeeded
    Job identifier:
    3jd5pts6ofduj4co
  • Action:
    calculate_measures_dm
    Status:
    Succeeded
    Job identifier:
    p5ejyi7zv63kud37
  • Action:
    time_series_dm
    Status:
    Succeeded
    Job identifier:
    2t5owkrswglzhog2
  • Action:
    graphs_dm
    Status:
    Succeeded
    Job identifier:
    faicb7ah5vhtfuk4
  • Action:
    model_checks_dm
    Status:
    Succeeded
    Job identifier:
    yl3dgvjpzxbnjlgm

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 172:17:38

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Succeeded
Backend
TPP
Workspace
covid-collateral
Requested by
Ruth Costello
Branch
main
Force run dependencies
No
Git commit hash
7a699af
Requested actions
  • generate_study_population_static
  • generate_study_population
  • join_cohorts_cvd
  • generate_study_population_mh
  • join_cohorts_mh
  • generate_study_population_dm
  • generate_study_population_resp
  • generate_study_population_tables_2019
  • generate_study_population_tables_2020
  • generate_study_population_tables_2021
  • create_baseline_tables
  • calculate_measures
  • calculate_measures_mh
  • calculate_measures_dm
  • calculate_measures_resp
  • graphs_mh_cvd
  • graphs_dm
  • graphs_resp
  • model_checks_dm
  • model_checks_resp
  • model_checks_cvd
  • model_checks_mh
  • time_series_resp
  • time_series_dm
  • time_series_cvd
  • time_series_mh
  • generate_study_population_survival_pre
  • generate_study_population_survival_pandemic
  • generate_study_population_survival_wave1
  • generate_study_population_survival_easing1
  • generate_study_population_survival_wave2
  • generate_study_population_survival_easing2
  • generate_study_population_survival_wave3
  • generate_study_population_survival_easing3
  • cox_model_prep

Code comparison

Compare the code used in this job request