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Job request: 10765

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
covid-collateral
ID:
dqlxfbquprxxwg25
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Ruth Costello requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    cox_models_heart_failure
    Status:
    Status: Failed
    Job identifier:
    57yap3iob2tcsen5
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_depress
    Status:
    Status: Failed
    Job identifier:
    6zl52u3pwcfzdess
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_vte
    Status:
    Status: Failed
    Job identifier:
    u6oqfx7vrntp7jef
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_t1dm
    Status:
    Status: Failed
    Job identifier:
    2bioxqaeglds352h
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_stroke
    Status:
    Status: Failed
    Job identifier:
    haemgiloj2o5wjkn
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_anx
    Status:
    Status: Failed
    Job identifier:
    cobwfsrslm7dfb7i
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_t2dm
    Status:
    Status: Failed
    Job identifier:
    pjciaw5elfmxlcra
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_dm_keto
    Status:
    Status: Failed
    Job identifier:
    tjybb4rqa7vicl64
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_asthma
    Status:
    Status: Failed
    Job identifier:
    3akrdhymvokeli5i
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_copd
    Status:
    Status: Failed
    Job identifier:
    f5jwdn6h66wgjwkf
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_models_mi
    Status:
    Status: Failed
    Job identifier:
    vrogsxbn36ovpqsv
    Error:
    nonzero_exit: Job exited with error code 1

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 01:18:51

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-collateral
Requested by
Ruth Costello
Branch
main
Force run dependencies
No
Git commit hash
e463a0c
Requested actions
  • cox_models_mi
  • cox_models_stroke
  • cox_models_heart_failure
  • cox_models_vte
  • cox_models_t1dm
  • cox_models_t2dm
  • cox_models_dm_keto
  • cox_models_asthma
  • cox_models_copd
  • cox_models_depress
  • cox_models_anx

Code comparison

Compare the code used in this job request