Skip to content

Job request: 12655

Organisation:
Bennett Institute
Workspace:
comparative-booster_main
ID:
2hjjad7qbh4745gi
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract_ICD10check
    Status:
    Succeeded
    Job identifier:
    ldiggeuruudakew5
  • Action:
    extract
    Status:
    Succeeded
    Job identifier:
    7ktur73ryvotrahq
  • Action:
    report_ICD10check
    Status:
    Succeeded
    Job identifier:
    p4jtnrhk3lnpl5yy
  • Action:
    data_process
    Status:
    Succeeded
    Job identifier:
    amhsyk2gcrkrk2ih
  • Action:
    data_selection
    Status:
    Succeeded
    Job identifier:
    bakokntb7ynnqmnt
  • Action:
    skim_process
    Status:
    Succeeded
    Job identifier:
    vgnvgyiv6arhmlbm
  • Action:
    geography
    Status:
    Failed
    Job identifier:
    zmb6tsng6nhppdrk
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_B
    Status:
    Succeeded
    Job identifier:
    mbe4ddkcae7nrcyj
  • Action:
    match_A
    Status:
    Succeeded
    Job identifier:
    opooixn7t6jphuit
  • Action:
    skim_selection
    Status:
    Succeeded
    Job identifier:
    2qyyyxb72njn5c66
  • Action:
    km_A_all_coviddeath
    Status:
    Failed
    Job identifier:
    yw36x73fyugauiz4
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_variantera_coviddeath
    Status:
    Failed
    Job identifier:
    dnvbdgrbyp7t4cxu
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    delayedentry_A_all_coviddeath
    Status:
    Succeeded
    Job identifier:
    bn6ifc6ceamxa33i
  • Action:
    km_A_cev_cv_noncoviddeath
    Status:
    Failed
    Job identifier:
    575xv22wdtqlttle
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_cev_cv_postest
    Status:
    Failed
    Job identifier:
    zazijnrjr5hv4sd3
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_variantera_covidemergency
    Status:
    Succeeded
    Job identifier:
    gggd7qoaa5ieet7p
  • Action:
    km_A_all_covidadmittedproxy1
    Status:
    Failed
    Job identifier:
    ldiuvn2jliftdg2q
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_age65plus_covidadmittedproxy1
    Status:
    Failed
    Job identifier:
    mriscer2hroxwxn3
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_age65plus_coviddeath
    Status:
    Failed
    Job identifier:
    2zaiugnd5oa5vz5n
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_prior_covid_infection_covidadmittedproxy1
    Status:
    Failed
    Job identifier:
    2ccrbstjdb6kujop
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_prior_covid_infection_coviddeath
    Status:
    Succeeded
    Job identifier:
    wml7iqs4btluw7ax
  • Action:
    km_A_prior_covid_infection_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    w2eh6ocbewrohc2v
  • Action:
    delayedentry_A_all_postest
    Status:
    Failed
    Job identifier:
    gnxq26j5ktx6cigl
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_all_covidcritcare
    Status:
    Failed
    Job identifier:
    afvqd5tbxuoplm26
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_cev_cv_covidcritcare
    Status:
    Succeeded
    Job identifier:
    p3ixehdkxjnjwe2k
  • Action:
    delayedentry_A_all_covidadmittedproxy1
    Status:
    Failed
    Job identifier:
    t6wtklxrninsipcs
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_A_prior_covid_infection_covidadmitted
    Status:
    Succeeded
    Job identifier:
    yqsixzfqpozl3xvo
  • Action:
    km_A_cev_cv_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    exnlbghj7bjjccf2
  • Action:
    km_A_all_covidemergency
    Status:
    Succeeded
    Job identifier:
    zor37aavb7pcavya
  • Action:
    km_A_vax12_type_coviddeath
    Status:
    Succeeded
    Job identifier:
    qdztxdxctsspdext
  • Action:
    km_A_age65plus_covidadmitted
    Status:
    Succeeded
    Job identifier:
    34enannpawyvwtyn
  • Action:
    km_A_cev_cv_covidemergency
    Status:
    Succeeded
    Job identifier:
    elea2upbz6ycexcz
  • Action:
    km_A_prior_covid_infection_postest
    Status:
    Succeeded
    Job identifier:
    enyprxbd5h4iti4a
  • Action:
    match_report_A
    Status:
    Succeeded
    Job identifier:
    2nyz7v3fnbb5kd3q
  • Action:
    km_A_cev_cv_covidadmitted
    Status:
    Succeeded
    Job identifier:
    qo4trja5k7spio7q
  • Action:
    km_A_age65plus_postest
    Status:
    Succeeded
    Job identifier:
    ndhfse7hk5huxuku
  • Action:
    km_A_vax12_type_postest
    Status:
    Succeeded
    Job identifier:
    3efr57fym5irw7vw
  • Action:
    delayedentry_A_all_covidcritcare
    Status:
    Succeeded
    Job identifier:
    chh6thwrafsqrg2m
  • Action:
    km_A_all_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    6mmzvbshuvzctw46
  • Action:
    km_A_prior_covid_infection_covidemergency
    Status:
    Succeeded
    Job identifier:
    xmqmtrpltvtpado4
  • Action:
    km_A_vax12_type_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    lb2ej4p3lnwhwn4s
  • Action:
    km_A_age65plus_covidemergency
    Status:
    Succeeded
    Job identifier:
    3the43rhr6b6ik43
  • Action:
    km_A_prior_covid_infection_covidcritcare
    Status:
    Succeeded
    Job identifier:
    vrf5cuqjaayukuuj
  • Action:
    km_A_age65plus_covidcritcare
    Status:
    Succeeded
    Job identifier:
    5jzrzmggn67hlfzn
  • Action:
    km_A_age65plus_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    l3nk25vhb7xazpip
  • Action:
    delayedentry_A_all_covidemergency
    Status:
    Succeeded
    Job identifier:
    gfwcfuk2xa5z6p35
  • Action:
    km_A_vax12_type_covidadmitted
    Status:
    Succeeded
    Job identifier:
    g2pfnelsk6enru4s
  • Action:
    km_A_variantera_postest
    Status:
    Succeeded
    Job identifier:
    z7dnguaiitl56cmq
  • Action:
    km_A_variantera_covidadmitted
    Status:
    Succeeded
    Job identifier:
    wuqg2ixxxb25w7ok
  • Action:
    km_A_vax12_type_covidcritcare
    Status:
    Succeeded
    Job identifier:
    luhaxb23hnyzb2un
  • Action:
    km_A_variantera_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    ak4ryknenza7em73
  • Action:
    km_A_all_covidadmitted
    Status:
    Succeeded
    Job identifier:
    yhm7muhblfjcljag
  • Action:
    km_A_vax12_type_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    w3gtvkvk7hwaxff6
  • Action:
    delayedentry_A_all_covidadmitted
    Status:
    Succeeded
    Job identifier:
    rt34yorhxjkeglrq
  • Action:
    delayedentry_A_all_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    k33565h3lkgqwfdl
  • Action:
    km_A_cev_cv_coviddeath
    Status:
    Succeeded
    Job identifier:
    ygolneocf3scdk6u
  • Action:
    km_A_vax12_type_covidemergency
    Status:
    Succeeded
    Job identifier:
    vincgirrib6n75ml
  • Action:
    km_A_variantera_covidcritcare
    Status:
    Succeeded
    Job identifier:
    pf3ggak5svqoqsrl
  • Action:
    km_A_variantera_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    l3rg466o6ejh32jw
  • Action:
    km_A_all_postest
    Status:
    Succeeded
    Job identifier:
    umk2yqnebsvgwi7e
  • Action:
    km_B_variantera_postest
    Status:
    Succeeded
    Job identifier:
    2atnyo7ra454i6qz
  • Action:
    km_B_age65plus_covidcritcare
    Status:
    Succeeded
    Job identifier:
    5f7bmjgoa5uunvgi
  • Action:
    km_B_prior_covid_infection_coviddeath
    Status:
    Succeeded
    Job identifier:
    2d7fci2r62onzt3g
  • Action:
    km_B_cev_cv_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    pt77cmws56d7dyon
  • Action:
    delayedentry_B_all_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    6pi5nnggcswew675
  • Action:
    km_B_variantera_covidadmitted
    Status:
    Succeeded
    Job identifier:
    ol7gucbcpmdn2xmb
  • Action:
    km_B_vax12_type_postest
    Status:
    Succeeded
    Job identifier:
    aycxuy6i6xrtdjib
  • Action:
    km_B_all_postest
    Status:
    Succeeded
    Job identifier:
    uyzwvulwl7mdmwzi
  • Action:
    delayedentry_B_all_covidcritcare
    Status:
    Succeeded
    Job identifier:
    pdpj2kcrb2qvwwjq
  • Action:
    km_B_all_covidadmitted
    Status:
    Succeeded
    Job identifier:
    xdgz6t6u3b3ukrkj
  • Action:
    km_B_prior_covid_infection_covidemergency
    Status:
    Succeeded
    Job identifier:
    qlzpzvihjqat5re4
  • Action:
    km_B_variantera_covidcritcare
    Status:
    Succeeded
    Job identifier:
    wuqyyxtvne3evtul
  • Action:
    km_B_age65plus_coviddeath
    Status:
    Succeeded
    Job identifier:
    7mpfgvwbzd544asb
  • Action:
    km_B_cev_cv_covidemergency
    Status:
    Succeeded
    Job identifier:
    zxsdqeecdwnwxqis
  • Action:
    km_B_prior_covid_infection_postest
    Status:
    Succeeded
    Job identifier:
    5me4x72t6hihjbgq
  • Action:
    delayedentry_B_all_coviddeath
    Status:
    Succeeded
    Job identifier:
    n3oph6g64b26aaea
  • Action:
    km_B_cev_cv_covidcritcare
    Status:
    Succeeded
    Job identifier:
    e4h7xy32nq4mrh7f
  • Action:
    km_B_prior_covid_infection_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    bymydnerf4iaxgb6
  • Action:
    km_B_variantera_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    7qdhetadr4f6qt5p
  • Action:
    km_B_cev_cv_postest
    Status:
    Succeeded
    Job identifier:
    zqidq4omp7n7u7rf
  • Action:
    km_B_age65plus_covidadmitted
    Status:
    Succeeded
    Job identifier:
    krrwz7ejadsogkls
  • Action:
    km_B_prior_covid_infection_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    fva3tuzhq73kiytf
  • Action:
    km_B_variantera_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    y3753mmbh3o3b3ht
  • Action:
    km_B_age65plus_covidemergency
    Status:
    Succeeded
    Job identifier:
    k6ecyjtbuzrhe4il
  • Action:
    km_B_age65plus_postest
    Status:
    Succeeded
    Job identifier:
    t36oyo5wf4axslad
  • Action:
    km_B_vax12_type_covidcritcare
    Status:
    Succeeded
    Job identifier:
    cgfkaxzdo3yujydg
  • Action:
    km_B_vax12_type_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    zuzumzoiycaiof6g
  • Action:
    km_B_vax12_type_covidemergency
    Status:
    Succeeded
    Job identifier:
    y5iyw3l33hdmcnwv
  • Action:
    km_B_all_covidemergency
    Status:
    Succeeded
    Job identifier:
    msd4jebz5enkbxpi
  • Action:
    km_B_vax12_type_covidadmitted
    Status:
    Succeeded
    Job identifier:
    ihcxjcpfvwasyxtm
  • Action:
    km_B_prior_covid_infection_covidadmitted
    Status:
    Succeeded
    Job identifier:
    3fhorhq3i4m4q4ml
  • Action:
    km_B_cev_cv_covidadmitted
    Status:
    Succeeded
    Job identifier:
    ez6g477t42wb7bp5
  • Action:
    km_B_vax12_type_coviddeath
    Status:
    Succeeded
    Job identifier:
    ir6mgvkahfxmjxdn
  • Action:
    delayedentry_B_all_postest
    Status:
    Succeeded
    Job identifier:
    sm2m6zkf7laotot6
  • Action:
    km_B_all_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    7p6yc4k6mjymzz35
  • Action:
    km_B_cev_cv_coviddeath
    Status:
    Succeeded
    Job identifier:
    jt4rxb5id6eyfdzb
  • Action:
    km_B_age65plus_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    ljz6dzlkph4oj7gi
  • Action:
    km_B_all_covidcritcare
    Status:
    Succeeded
    Job identifier:
    nvhrstjgvv63vwwk
  • Action:
    km_B_cev_cv_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    v3fs3izoycwkhrtr
  • Action:
    km_B_variantera_coviddeath
    Status:
    Succeeded
    Job identifier:
    bth577qkta6r6qaq
  • Action:
    km_B_all_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    zjhl4svofdhwyco7
  • Action:
    km_B_all_coviddeath
    Status:
    Succeeded
    Job identifier:
    25awau5yhi6hx4jy
  • Action:
    km_B_variantera_covidemergency
    Status:
    Succeeded
    Job identifier:
    dc7pu2ykswxff46i
  • Action:
    km_B_vax12_type_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    roaouwl4z2fbzyi3
  • Action:
    km_B_prior_covid_infection_covidcritcare
    Status:
    Succeeded
    Job identifier:
    npqqduvjgcngiywz
  • Action:
    delayedentry_B_all_covidadmitted
    Status:
    Succeeded
    Job identifier:
    5xxuqdizt6qvysve
  • Action:
    delayedentry_B_all_covidemergency
    Status:
    Succeeded
    Job identifier:
    fvh5xmay6buy4wnx
  • Action:
    km_B_age65plus_covidadmittedproxy1
    Status:
    Succeeded
    Job identifier:
    qrjapmvaz2rao67z
  • Action:
    delayedentry_B_all_covidadmittedproxy1
    Status:
    Failed
    Job identifier:
    53axjns4ucvsgmia
    Error:
    internal_error: Internal error: this usually means a platform issue rather than a problem for users to fix. The tech team are automatically notified of these errors and will be investigating.
  • Action:
    release_objects
    Status:
    Failed
    Job identifier:
    d2nkofaffugzlqpd
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    contrasts_combine_B
    Status:
    Failed
    Job identifier:
    jyvj33estwzfhjmt
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    contrasts_combine_A
    Status:
    Failed
    Job identifier:
    q4evyj2vpphisnzr
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_report_B
    Status:
    Failed
    Job identifier:
    n2gngpgfrz6h47ix
    Error:
    internal_error: Internal error: this usually means a platform issue rather than a problem for users to fix. The tech team are automatically notified of these errors and will be investigating.

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 116:26:13

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
comparative-booster_main
Requested by
Will Hulme
Branch
main
Force run dependencies
Yes
Git commit hash
c501882
Requested actions
  • run_all

Code comparison

Compare the code used in this job request