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Job request: 13074

Organisation:
Bennett Institute
Workspace:
comparative-booster_main
ID:
7wgrufig4uew4hre
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract
    Status:
    Succeeded
    Job identifier:
    nw6rftjh3rerlnfl
  • Action:
    data_process
    Status:
    Succeeded
    Job identifier:
    4x4j766g5lv5bcag
  • Action:
    skim_process
    Status:
    Succeeded
    Job identifier:
    4peurhplr5x4wdlj
  • Action:
    data_selection
    Status:
    Succeeded
    Job identifier:
    jmpiqe5cvc76o5eo
  • Action:
    skim_selection
    Status:
    Succeeded
    Job identifier:
    o73e6txyqhspitno
  • Action:
    match_B
    Status:
    Succeeded
    Job identifier:
    ufnj3rfdee3wjx5t
  • Action:
    km_B_variantera_covidcritcare
    Status:
    Succeeded
    Job identifier:
    eeznsce4orhq74ow
  • Action:
    km_B_prior_covid_infection_covidemergency
    Status:
    Succeeded
    Job identifier:
    p36lgajm6dlablqh
  • Action:
    delayedentry_B_all_covidadmitted
    Status:
    Failed
    Job identifier:
    idoit7xakxdufhyx
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_B_prior_covid_infection_covidadmitted
    Status:
    Failed
    Job identifier:
    7gqdx7zcgnlokqfs
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_B_age65plus_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    ssqedpydebbphkca
  • Action:
    km_B_vax12_type_covidcritcare
    Status:
    Failed
    Job identifier:
    fjmtampjphnrufyp
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_B_cev_cv_covidemergency
    Status:
    Succeeded
    Job identifier:
    4hfn2lsptdja6q5a
  • Action:
    km_B_all_coviddeath
    Status:
    Succeeded
    Job identifier:
    wpvuuluigv4c5ofc
  • Action:
    km_B_prior_covid_infection_coviddeath
    Status:
    Succeeded
    Job identifier:
    gt2rydfctpnmnqlf
  • Action:
    km_B_cev_cv_coviddeath
    Status:
    Succeeded
    Job identifier:
    khkyrm2n6y6ddjzs
  • Action:
    delayedentry_B_all_coviddeath
    Status:
    Failed
    Job identifier:
    dyj3dczxuq35ecbu
    Error:
    nonzero_exit: Job exited with error code 137: Ran out of memory (limit for this job was 128.00GB)
  • Action:
    km_B_all_postest
    Status:
    Succeeded
    Job identifier:
    6vt22co7gdt5t5rb
  • Action:
    km_B_all_covidadmitted
    Status:
    Succeeded
    Job identifier:
    s53ibuahml36njxn
  • Action:
    km_B_vax12_type_covidemergency
    Status:
    Succeeded
    Job identifier:
    ona2afmxqbj52brx
  • Action:
    delayedentry_B_all_postest
    Status:
    Succeeded
    Job identifier:
    piixy6e4xqicdaco
  • Action:
    eventcounts_B
    Status:
    Succeeded
    Job identifier:
    ktjgfj5kvuia4f4j
  • Action:
    km_B_prior_covid_infection_covidcritcare
    Status:
    Succeeded
    Job identifier:
    hbfs2gzac2xeoruc
  • Action:
    km_B_variantera_postest
    Status:
    Succeeded
    Job identifier:
    gkb6vkynxzjnbkt2
  • Action:
    match_report_B
    Status:
    Succeeded
    Job identifier:
    zxkvdzft5xz4p5id
  • Action:
    km_B_age65plus_covidcritcare
    Status:
    Succeeded
    Job identifier:
    iblhzckl4v6jze5p
  • Action:
    km_B_vax12_type_covidadmitted
    Status:
    Succeeded
    Job identifier:
    r3yicb5gscifh4da
  • Action:
    km_B_cev_cv_postest
    Status:
    Succeeded
    Job identifier:
    osqorltzq4o3xolv
  • Action:
    km_B_all_covidemergency
    Status:
    Succeeded
    Job identifier:
    wufmlipa2ef64pii
  • Action:
    km_B_variantera_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    kki27fj6ycsajyqd
  • Action:
    km_B_ageband_covidcritcare
    Status:
    Succeeded
    Job identifier:
    p4kkwcjvd7cez5of
  • Action:
    km_B_all_covidcritcare
    Status:
    Succeeded
    Job identifier:
    6xxhm64d4jzwmth4
  • Action:
    delayedentry_B_all_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    gglt7hgsgpq32rsh
  • Action:
    km_B_age65plus_covidemergency
    Status:
    Succeeded
    Job identifier:
    zvejtnoojpfc7mc3
  • Action:
    delayedentry_B_all_covidcritcare
    Status:
    Succeeded
    Job identifier:
    k6ebgiic2al4vsym
  • Action:
    km_B_variantera_covidemergency
    Status:
    Succeeded
    Job identifier:
    qx7yrsf7wlz64vgh
  • Action:
    km_B_age65plus_covidadmitted
    Status:
    Succeeded
    Job identifier:
    cfy6gqjeuofgzp2m
  • Action:
    km_B_ageband_coviddeath
    Status:
    Succeeded
    Job identifier:
    hkin6u6cgl6iqxm7
  • Action:
    km_B_vax12_type_postest
    Status:
    Succeeded
    Job identifier:
    foq5mf2wct34rjok
  • Action:
    km_B_cev_cv_covidcritcare
    Status:
    Succeeded
    Job identifier:
    b4h3bjcyyaw5fyjj
  • Action:
    km_B_ageband_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    hgzlhne4x4t5ucap
  • Action:
    km_B_all_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    cdsbexvlau3ofzcm
  • Action:
    km_B_ageband_postest
    Status:
    Succeeded
    Job identifier:
    izkgpshlqcvbmscz
  • Action:
    km_B_variantera_coviddeath
    Status:
    Succeeded
    Job identifier:
    glxnax357653ky4e
  • Action:
    km_B_ageband_covidemergency
    Status:
    Succeeded
    Job identifier:
    24fnd4klixg5zmjt
  • Action:
    km_B_ageband_covidadmitted
    Status:
    Succeeded
    Job identifier:
    uzn64ekdnnfofsi6
  • Action:
    km_B_age65plus_postest
    Status:
    Succeeded
    Job identifier:
    dzofzbnszpc3vngy
  • Action:
    delayedentry_B_all_covidemergency
    Status:
    Succeeded
    Job identifier:
    ef4ve6tjkdi3njbf
  • Action:
    km_B_variantera_covidadmitted
    Status:
    Succeeded
    Job identifier:
    xybugar3hryuanep
  • Action:
    km_B_prior_covid_infection_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    3qdfrm7lhtgofvdk
  • Action:
    km_B_vax12_type_coviddeath
    Status:
    Succeeded
    Job identifier:
    oq4vg4wgxpj6zi4h
  • Action:
    km_B_cev_cv_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    til5m4z2kultqghh
  • Action:
    km_B_cev_cv_covidadmitted
    Status:
    Succeeded
    Job identifier:
    r5mvwlo3iz3lqagw
  • Action:
    km_B_prior_covid_infection_postest
    Status:
    Succeeded
    Job identifier:
    ncsne5ar5xjuoxmw
  • Action:
    km_B_age65plus_coviddeath
    Status:
    Succeeded
    Job identifier:
    ntvx5geleiuqtd6k
  • Action:
    km_B_vax12_type_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    pps6f6ouywrthn3v
  • Action:
    contrasts_combine_B
    Status:
    Failed
    Job identifier:
    qa2t6tksjvrsz6ib
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 62:16:06

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
comparative-booster_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
343bab1
Requested actions
  • extract
  • data_process
  • skim_process
  • data_selection
  • skim_selection
  • match_B
  • match_report_B
  • km_B_all_postest
  • km_B_all_covidemergency
  • km_B_all_covidadmitted
  • km_B_all_covidcritcare
  • km_B_all_coviddeath
  • km_B_all_noncoviddeath
  • delayedentry_B_all_postest
  • delayedentry_B_all_covidemergency
  • delayedentry_B_all_covidadmitted
  • delayedentry_B_all_covidcritcare
  • delayedentry_B_all_coviddeath
  • delayedentry_B_all_noncoviddeath
  • km_B_vax12_type_postest
  • km_B_vax12_type_covidemergency
  • km_B_vax12_type_covidadmitted
  • km_B_vax12_type_covidcritcare
  • km_B_vax12_type_coviddeath
  • km_B_vax12_type_noncoviddeath
  • km_B_cev_cv_postest
  • km_B_cev_cv_covidemergency
  • km_B_cev_cv_covidadmitted
  • km_B_cev_cv_covidcritcare
  • km_B_cev_cv_coviddeath
  • km_B_cev_cv_noncoviddeath
  • km_B_prior_covid_infection_postest
  • km_B_prior_covid_infection_covidemergency
  • km_B_prior_covid_infection_covidadmitted
  • km_B_prior_covid_infection_covidcritcare
  • km_B_prior_covid_infection_coviddeath
  • km_B_prior_covid_infection_noncoviddeath
  • km_B_age65plus_postest
  • km_B_age65plus_covidemergency
  • km_B_age65plus_covidadmitted
  • km_B_age65plus_covidcritcare
  • km_B_age65plus_coviddeath
  • km_B_age65plus_noncoviddeath
  • km_B_ageband_postest
  • km_B_ageband_covidemergency
  • km_B_ageband_covidadmitted
  • km_B_ageband_covidcritcare
  • km_B_ageband_coviddeath
  • km_B_ageband_noncoviddeath
  • km_B_variantera_postest
  • km_B_variantera_covidemergency
  • km_B_variantera_covidadmitted
  • km_B_variantera_covidcritcare
  • km_B_variantera_coviddeath
  • km_B_variantera_noncoviddeath
  • eventcounts_B
  • contrasts_combine_B

Code comparison

Compare the code used in this job request