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Job request: 1384

Organisation:
Bennett Institute
Workspace:
covid-vaccine-effectiveness-research_main
ID:
few5czlucnfucrah
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract_all
    Status:
    Succeeded
    Job identifier:
    cdfzs72dypmks6ai
  • Action:
    data_process_all
    Status:
    Succeeded
    Job identifier:
    q2f52rpzcnbtlrxl
  • Action:
    data_define_cohorts
    Status:
    Succeeded
    Job identifier:
    mimas5b7srw4bp7k
  • Action:
    data_properties_all
    Status:
    Succeeded
    Job identifier:
    rrqdre6b5i5cdu4j
  • Action:
    data_stset_over80s
    Status:
    Succeeded
    Job identifier:
    gfn6pgqxybw343ln
  • Action:
    models_cox_over80s_postest_any_all_dose1
    Status:
    Failed
    Job identifier:
    4z4cmzhglv5ljfju
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    models_over80s_postest_any_all_dose1
    Status:
    Failed
    Job identifier:
    nlihq4ugogjiqc2x
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    report_cox_over80s_postest_any_all_dose1
    Status:
    Failed
    Job identifier:
    f6uzuxsz4x3noo4v
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_ipw_over80s_postest_any_all_dose1
    Status:
    Failed
    Job identifier:
    asgcbqwhmz2lxcc4
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_over80s_postest_any_all_dose1
    Status:
    Failed
    Job identifier:
    prrsaojeovejywcv
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 16:43:11

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-vaccine-effectiveness-research_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
686ff4c
Requested actions
  • extract_all
  • data_process_all
  • data_properties_all
  • data_define_cohorts
  • data_stset_over80s
  • models_over80s_postest_any_all_dose1
  • report_ipw_over80s_postest_any_all_dose1
  • report_over80s_postest_any_all_dose1
  • models_cox_over80s_postest_any_all_dose1
  • report_cox_over80s_postest_any_all_dose1

Code comparison

Compare the code used in this job request