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Job request: 1571

Organisation:
Bennett Institute
Workspace:
covid-vaccine-effectiveness-research_main
ID:
p5sfsgxuf72hoh6w
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract_all
    Status:
    Succeeded
    Job identifier:
    bngo3kto6sc7f5g3
  • Action:
    data_process_all
    Status:
    Succeeded
    Job identifier:
    p63yjxj5az66qimf
  • Action:
    data_properties_all
    Status:
    Succeeded
    Job identifier:
    z7itp7ps6ay5rn2u
  • Action:
    data_define_cohorts
    Status:
    Succeeded
    Job identifier:
    bfkkdnnfhvwq6xjj
  • Action:
    data_stset_over80s
    Status:
    Succeeded
    Job identifier:
    5jgxslpskz2ikfc4
  • Action:
    descr_table1_over80s
    Status:
    Succeeded
    Job identifier:
    6k25yf7gzijwobzx
  • Action:
    models_cox_over80s_postest_any_all_region
    Status:
    Succeeded
    Job identifier:
    nvgpoonh7qx4b6wa
  • Action:
    models_cox_over80s_coviddeath_any_all_region
    Status:
    Succeeded
    Job identifier:
    o7hn7aza46alcj53
  • Action:
    data_properties_over80s_fixed
    Status:
    Succeeded
    Job identifier:
    vglmqrrcl67g3pud
  • Action:
    models_over80s_postest_any_all
    Status:
    Succeeded
    Job identifier:
    6hvi352vv43eoe3n
  • Action:
    data_properties_over80s_tte
    Status:
    Succeeded
    Job identifier:
    q7em2hjckg4svn5x
  • Action:
    descr_events_over80s
    Status:
    Succeeded
    Job identifier:
    m6ocng7ok5h7d6hj
  • Action:
    models_over80s_coviddeath_any_all
    Status:
    Failed
    Job identifier:
    il2chw4sot7oeoj4
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    models_cox_over80s_covidadmitted_any_all_region
    Status:
    Succeeded
    Job identifier:
    3mt6jhaksm4zroyx
  • Action:
    models_cox_over80s_noncoviddeath_any_all_region
    Status:
    Succeeded
    Job identifier:
    7cmgtenktu4t6ovu
  • Action:
    report_cox_over80s_postest_any_all_region
    Status:
    Succeeded
    Job identifier:
    23fiiecw6n6bvj2s
  • Action:
    report_cox_over80s_coviddeath_any_all_region
    Status:
    Succeeded
    Job identifier:
    duj4rca3k6xfu62g
  • Action:
    models_over80s_covidadmitted_any_all
    Status:
    Failed
    Job identifier:
    tvz2sbxlw7qv5seq
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    models_over80s_noncoviddeath_any_all
    Status:
    Failed
    Job identifier:
    wnq3pyxnfv4piaot
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    report_cox_over80s_covidadmitted_any_all_region
    Status:
    Succeeded
    Job identifier:
    6xrsfe3wpd2xdj6c
  • Action:
    report_cox_over80s_noncoviddeath_any_all_region
    Status:
    Succeeded
    Job identifier:
    3kq3gljbifzyy6sa
  • Action:
    report_ipw_over80s_postest_any_all
    Status:
    Succeeded
    Job identifier:
    q6bnfzjt3a4zmpg7
  • Action:
    report_over80s_postest_any_all
    Status:
    Succeeded
    Job identifier:
    7strig7k22p4g6ek
  • Action:
    report_over80s_coviddeath_any_all
    Status:
    Failed
    Job identifier:
    bm6ubmv2um5ahujf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_over80s_covidadmitted_any_all
    Status:
    Failed
    Job identifier:
    2efjke3imd6u7umw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_ipw_over80s_noncoviddeath_any_all
    Status:
    Failed
    Job identifier:
    qbicvv4pwlqudjk6
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_over80s_noncoviddeath_any_all
    Status:
    Failed
    Job identifier:
    wgqshg6bqs3emszw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_ipw_over80s_coviddeath_any_all
    Status:
    Failed
    Job identifier:
    d377qzqxu77wkspk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_ipw_over80s_covidadmitted_any_all
    Status:
    Failed
    Job identifier:
    eoqhn5hnmof6vok7
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 07:31:00

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-vaccine-effectiveness-research_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
a4269e2
Requested actions
  • extract_all
  • data_process_all
  • data_properties_all
  • data_define_cohorts
  • data_stset_over80s
  • data_properties_over80s_fixed
  • data_properties_over80s_tte
  • descr_table1_over80s
  • descr_events_over80s
  • models_over80s_postest_any_all
  • report_ipw_over80s_postest_any_all
  • report_over80s_postest_any_all
  • models_cox_over80s_postest_any_all_region
  • report_cox_over80s_postest_any_all_region
  • models_over80s_covidadmitted_any_all
  • report_ipw_over80s_covidadmitted_any_all
  • report_over80s_covidadmitted_any_all
  • models_cox_over80s_covidadmitted_any_all_region
  • report_cox_over80s_covidadmitted_any_all_region
  • models_over80s_noncoviddeath_any_all
  • report_ipw_over80s_noncoviddeath_any_all
  • report_over80s_noncoviddeath_any_all
  • models_cox_over80s_noncoviddeath_any_all_region
  • report_cox_over80s_noncoviddeath_any_all_region
  • models_over80s_coviddeath_any_all
  • report_ipw_over80s_coviddeath_any_all
  • report_over80s_coviddeath_any_all
  • models_cox_over80s_coviddeath_any_all_region
  • report_cox_over80s_coviddeath_any_all_region

Code comparison

Compare the code used in this job request