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Job request: 2795

Organisation:
Bennett Institute
Workspace:
covid-vaccine-effectiveness-research_positivity
ID:
vzsxlf6wswhq5iio
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    model_over80s_all_any_death
    Status:
    Succeeded
    Job identifier:
    y5idrzyxsmq5ytuv
  • Action:
    extract_in70s
    Status:
    Succeeded
    Job identifier:
    j7f2x7zhhtjrpwgq
  • Action:
    report_ipw_over80s_all_any_death
    Status:
    Succeeded
    Job identifier:
    arcq4c4tvi3qntvo
  • Action:
    report_incidence_over80s_all_any_death
    Status:
    Succeeded
    Job identifier:
    ydzgbc4equbz4fsj
  • Action:
    report_msm_over80s_all_any_death
    Status:
    Succeeded
    Job identifier:
    phhsncmji5vs3snl
  • Action:
    data_process_in70s
    Status:
    Succeeded
    Job identifier:
    usheufne3qwkszci
  • Action:
    data_properties_in70s
    Status:
    Succeeded
    Job identifier:
    taux53am4yltjesk
  • Action:
    data_selection_in70s
    Status:
    Succeeded
    Job identifier:
    7ppfbsmlg5zdpcxs
  • Action:
    data_process_long_in70s
    Status:
    Succeeded
    Job identifier:
    4mvzt6za45clxdvk
  • Action:
    check_ethnicity_in70s
    Status:
    Succeeded
    Job identifier:
    7juu3nc6gmlgsvd3
  • Action:
    descr_table1_in70s
    Status:
    Succeeded
    Job identifier:
    ucn5c6fvsnfa3ylx
  • Action:
    descr_tableirr_in70s
    Status:
    Failed
    Job identifier:
    it2xevvkltmsxaka
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    data_stset_in70s
    Status:
    Succeeded
    Job identifier:
    k2squlmbvmf6rxlo
  • Action:
    descr_events_in70s
    Status:
    Succeeded
    Job identifier:
    34yg66xneujgwva5
  • Action:
    data_samples_in70s
    Status:
    Succeeded
    Job identifier:
    k7xmp4evz44r7y7h
  • Action:
    model_in70s_all_any_postest
    Status:
    Failed
    Job identifier:
    kwu4m3lj5tgdixcl
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    model_in70s_all_pfizer_postest
    Status:
    Failed
    Job identifier:
    5rlpmolqbnra4icg
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    model_in70s_all_az_postest
    Status:
    Succeeded
    Job identifier:
    wtcjikoudyrnz6ie
  • Action:
    report_incidence_in70s_all_az_postest
    Status:
    Succeeded
    Job identifier:
    h2nmisj7fetdtav4
  • Action:
    report_msm_in70s_all_az_postest
    Status:
    Succeeded
    Job identifier:
    v3lc55vkfhe3la4g
  • Action:
    report_ipw_in70s_all_az_postest
    Status:
    Succeeded
    Job identifier:
    v4v76mvsp7ez3fvj
  • Action:
    report_msm_in70s_all_pfizer_postest
    Status:
    Failed
    Job identifier:
    rmgcrn7ycg7hjxot
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_incidence_in70s_all_any_postest
    Status:
    Failed
    Job identifier:
    gl72bt24he42yfsh
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_msm_in70s_all_any_postest
    Status:
    Failed
    Job identifier:
    no2tjyzx47t2m543
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_ipw_in70s_all_any_postest
    Status:
    Failed
    Job identifier:
    tiy4qf7nmact4tm3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_ipw_in70s_all_pfizer_postest
    Status:
    Failed
    Job identifier:
    nwbcyelexfh3a35t
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_incidence_in70s_all_pfizer_postest
    Status:
    Failed
    Job identifier:
    xcloa5o6odg46i4u
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 21:37:10

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-vaccine-effectiveness-research_positivity
Requested by
Will Hulme
Branch
positivity
Force run dependencies
No
Git commit hash
74338ef
Requested actions
  • model_over80s_all_any_death
  • report_ipw_over80s_all_any_death
  • report_msm_over80s_all_any_death
  • report_incidence_over80s_all_any_death
  • extract_in70s
  • data_process_in70s
  • data_process_long_in70s
  • data_properties_in70s
  • data_selection_in70s
  • data_stset_in70s
  • data_samples_in70s
  • check_ethnicity_in70s
  • descr_table1_in70s
  • descr_tableirr_in70s
  • descr_events_in70s
  • model_in70s_all_any_postest
  • report_ipw_in70s_all_any_postest
  • report_msm_in70s_all_any_postest
  • report_incidence_in70s_all_any_postest
  • model_in70s_all_pfizer_postest
  • report_ipw_in70s_all_pfizer_postest
  • report_msm_in70s_all_pfizer_postest
  • report_incidence_in70s_all_pfizer_postest
  • model_in70s_all_az_postest
  • report_ipw_in70s_all_az_postest
  • report_msm_in70s_all_az_postest
  • report_incidence_in70s_all_az_postest

Code comparison

Compare the code used in this job request