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Job request: 3223

Organisation:
Bennett Institute
Workspace:
covid-vaccine-effectiveness-research_positivity
ID:
phsuktp5vrqe5njs
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    design
    Status:
    Succeeded
    Job identifier:
    vck24dryudgk4pdd
  • Action:
    extract_over80s
    Status:
    Succeeded
    Job identifier:
    xp3agqpdtesvotck
  • Action:
    data_process_over80s
    Status:
    Succeeded
    Job identifier:
    dbasw6h37sg7ghuy
  • Action:
    check_ethnicity_over80s
    Status:
    Succeeded
    Job identifier:
    f5pwclzfur5y3zzf
  • Action:
    data_process_long_over80s
    Status:
    Succeeded
    Job identifier:
    pexisxtru6npjn3n
  • Action:
    data_properties_over80s
    Status:
    Succeeded
    Job identifier:
    yrfkem4wb6mvzpq4
  • Action:
    data_selection_over80s
    Status:
    Succeeded
    Job identifier:
    uadoanmfy7cmbeud
  • Action:
    descr_tableirr_exclude_over80s
    Status:
    Succeeded
    Job identifier:
    uyzmifutvzajyym6
  • Action:
    data_stset_over80s
    Status:
    Failed
    Job identifier:
    ccag6w4yy2x7zzky
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    descr_tableirrold_over80s
    Status:
    Failed
    Job identifier:
    s4qr7sd4jfl5xjxk
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    descr_tableirr_over80s
    Status:
    Succeeded
    Job identifier:
    gzth2nutshpdwsfe
  • Action:
    descr_table1_over80s
    Status:
    Succeeded
    Job identifier:
    nnv4b2h47pwyovt3
  • Action:
    model_over80s_all_any_postest
    Status:
    Failed
    Job identifier:
    aslqagpfqqpt2jss
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_msm_over80s_all_any_postest
    Status:
    Failed
    Job identifier:
    3v33yqmfkrterl76
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_incidence_over80s_all_any_postest
    Status:
    Failed
    Job identifier:
    6ng6lndncxbwu2j5
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_events_over80s
    Status:
    Failed
    Job identifier:
    q3guyp6itks6ihox
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_samples_over80s
    Status:
    Failed
    Job identifier:
    7m4wz56oubrrsfwr
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descr_preflight_over80s_all
    Status:
    Failed
    Job identifier:
    zivblmhrgnoqa7gc
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_ipw_over80s_all_any_postest
    Status:
    Failed
    Job identifier:
    4jgyoejmmfgdzg6t
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 13:44:24

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-vaccine-effectiveness-research_positivity
Requested by
Will Hulme
Branch
positivity
Force run dependencies
No
Git commit hash
d706293
Requested actions
  • design
  • extract_over80s
  • data_process_over80s
  • data_process_long_over80s
  • data_properties_over80s
  • data_selection_over80s
  • data_stset_over80s
  • data_samples_over80s
  • check_ethnicity_over80s
  • descr_table1_over80s
  • descr_tableirrold_over80s
  • descr_tableirr_over80s
  • descr_tableirr_exclude_over80s
  • descr_events_over80s
  • descr_preflight_over80s_all
  • model_over80s_all_any_postest
  • report_ipw_over80s_all_any_postest
  • report_msm_over80s_all_any_postest
  • report_incidence_over80s_all_any_postest

Code comparison

Compare the code used in this job request