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Job request: 4800

Organisation:
Bennett Institute
Workspace:
covid-vaccine-effectiveness-research_positivity
ID:
5s4aykkgyrliklel
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract_in70s
    Status:
    Failed
    Job identifier:
    24ishburcpz6b2a7
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    design
    Status:
    Succeeded
    Job identifier:
    sajctwdtg7cunb23
  • Action:
    extract_over80s
    Status:
    Failed
    Job identifier:
    odvhmkwogv5ko43y
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_any_covidadmitted
    Status:
    Failed
    Job identifier:
    ipixydemglkydmqi
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_process_long_in70s
    Status:
    Failed
    Job identifier:
    ao77xlhxa333kwal
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_process_over80s
    Status:
    Failed
    Job identifier:
    cfbvhu4ctlzljpnw
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_selection_in70s
    Status:
    Failed
    Job identifier:
    ay443bp2yqviaiuw
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_selection_over80s
    Status:
    Failed
    Job identifier:
    7oim6maz4k34qclg
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_any_death
    Status:
    Failed
    Job identifier:
    deedbttod2prxcjm
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_az_covidadmitted
    Status:
    Failed
    Job identifier:
    6kxqdwbeckcpygxl
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_az_death
    Status:
    Failed
    Job identifier:
    djozw56hpeoxid3k
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_az_postest
    Status:
    Failed
    Job identifier:
    zxzfqufwud5yiujb
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_az_covidadmitted
    Status:
    Failed
    Job identifier:
    6esrccjir5ec4yiq
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_any_postest
    Status:
    Failed
    Job identifier:
    gnjav5uxcebq4plg
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_any_postest
    Status:
    Failed
    Job identifier:
    btjvhobpjppahoju
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_az_death
    Status:
    Failed
    Job identifier:
    rrn2xufsujxvzkdu
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_az_covidadmitted
    Status:
    Failed
    Job identifier:
    74pbjlflp5wpawuu
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_az_death
    Status:
    Failed
    Job identifier:
    ve5yrhoshp6yoeld
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_pfizer_death
    Status:
    Failed
    Job identifier:
    fupy6q6mkxhlrnc7
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_pfizer_postest
    Status:
    Failed
    Job identifier:
    pzuf3hhjzavwukhb
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_any_covidadmitted
    Status:
    Failed
    Job identifier:
    4rf64ocg3swz5wyp
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_any_postest
    Status:
    Failed
    Job identifier:
    lnww6tgesqyue4o4
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_az_death
    Status:
    Failed
    Job identifier:
    rs2qyffgomii7isb
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_az_postest
    Status:
    Failed
    Job identifier:
    hdlc6ywa3rviao2c
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_pfizer_covidadmitted
    Status:
    Failed
    Job identifier:
    ujcevczb3fq5utac
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_pfizer_postest
    Status:
    Failed
    Job identifier:
    etllkvmtllplgkpc
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_any_covidadmitted
    Status:
    Failed
    Job identifier:
    v2nvj7ozhetlwttn
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_pfizer_covidadmitted
    Status:
    Failed
    Job identifier:
    pqlykjlgfwremq6l
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_pfizer_death
    Status:
    Failed
    Job identifier:
    kulatqcp6y6pfsoi
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_pfizer_covidadmitted
    Status:
    Failed
    Job identifier:
    ebbk3svblvhnszl2
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_pfizer_death
    Status:
    Failed
    Job identifier:
    njdm2z3nipgu5fx5
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_any_covidadmitted
    Status:
    Failed
    Job identifier:
    xkamajhjwz4syyuk
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_any_death
    Status:
    Failed
    Job identifier:
    ej5c2lm2benkjojk
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_process_long_over80s
    Status:
    Failed
    Job identifier:
    zwhsnihorravqr74
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_stset_over80s
    Status:
    Failed
    Job identifier:
    dshw6scsqpifsjxa
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_any_postest
    Status:
    Failed
    Job identifier:
    2eqxbc5khqopm4pb
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_in70s_all_0_pfizer_covidadmitted
    Status:
    Failed
    Job identifier:
    znzj3uj52dngfpzz
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_any_death
    Status:
    Failed
    Job identifier:
    y4ctblhvgltg73uw
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_az_postest
    Status:
    Failed
    Job identifier:
    spdu3yo222f3d664
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxmodel_over80s_all_0_pfizer_postest
    Status:
    Failed
    Job identifier:
    2u4iyy7xhtl5hqze
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_az_covidadmitted
    Status:
    Failed
    Job identifier:
    6yd2ftuqq7ok3qbp
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_in70s_all_0_pfizer_death
    Status:
    Failed
    Job identifier:
    k4glpflv2jfyihmi
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_any_death
    Status:
    Failed
    Job identifier:
    xos2llo3w4zrxgx4
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_az_postest
    Status:
    Failed
    Job identifier:
    gsatjjqpbqvmyptn
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_stset_in70s
    Status:
    Failed
    Job identifier:
    g34njcivwwkbt453
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    stcoxreport_over80s_all_0_pfizer_postest
    Status:
    Failed
    Job identifier:
    jnuroj4ealagi4dt
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    report_stcox_metacohorts
    Status:
    Failed
    Job identifier:
    4b6f4czvjdmvczzl
    Status message:
    cancelled_by_user: Cancelled by user
  • Action:
    data_process_in70s
    Status:
    Failed
    Job identifier:
    2aybgr3x4krnka7e
    Status message:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Job statistics

Status Count Percentage
Pending 0 0%
Running 0 0%
Succeeded 1 2.1%
Failed 47 97.9%

48 / 48 (100%) complete

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:47:05

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-vaccine-effectiveness-research_positivity
Requested by
Will Hulme
Branch
positivity
Force run dependencies
Yes
Git commit hash
88f46af
Requested actions
  • report_stcox_metacohorts

Code comparison

Compare the code used in this job request