Job request: 8223
- Organisation:
- Bennett Institute
- Workspace:
- covid_determinants
- ID:
- 5yp6pnuzzwe7gpx3
This page shows the technical details of what happened when authorised researcher Colm Andrews requested one or more actions to be run against real patient data in the project, within a secure environment.
By cross-referencing the indicated Requested Actions with the
Pipeline section below, you can infer what
security level
various outputs were written to. Outputs marked as
highly_sensitive
can never be viewed directly by a researcher; they can only
request that code runs against them. Outputs marked as
moderately_sensitive
can be viewed by an approved researcher by logging into a highly
secure environment. Only outputs marked as
moderately_sensitive
can be requested for release to the public, via a controlled
output review service.
Jobs
-
- Job identifier:
-
acinw4udvalhnvuk
-
- Job identifier:
-
lhrry6iytbmpzcy2
-
- Job identifier:
-
xwo4ktyqfs6llygd
Pipeline
Show project.yaml
version: '3.0'
expectations:
population_size: 1000
actions:
generate_study_population:
run: cohortextractor:latest generate_cohort --study-definition study_definition --output-dir=output --output-format feather
outputs:
highly_sensitive:
cohort: output/input.feather
generate_dataset_report:
run: >
dataset-report:v0.0.9
--input-files output/input.feather
--output-dir output/
needs: [generate_study_population]
outputs:
moderately_sensitive:
dataset_report: output/input.html
counts:
run: r:latest analysis/count_tables.r
needs: [generate_study_population]
outputs:
moderately_sensitive:
binary_table: output/tables/sex_ethn_binary.csv
binary_imd_table: output/tables/sex_ethn_binary_imd.csv
binary_5_table: output/tables/sex_ethn_5.csv
binary_16_table: output/tables/sex_ethn_16.csv
Timeline
-
Created:
-
Started:
-
Finished:
-
Runtime: 01:21:20
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job information
- Status
-
Succeeded
- Backend
- TPP
- Workspace
- covid_determinants
- Requested by
- Colm Andrews
- Branch
- main
- Force run dependencies
- No
- Git commit hash
- 8880788
- Requested actions
-
-
run_all
-
Code comparison
Compare the code used in this Job Request
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