Skip to content

Job request: 12800

Organisation:
Bennett Institute
Workspace:
appointments-short-data-report
ID:
vjexwa25voe4eogo
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Iain Dillingham requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    query_date_range
    Status:
    Status: Failed
    Job identifier:
    zo5dsoyjypzainwu
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    wrangle_date_range
    Status:
    Status: Failed
    Job identifier:
    f7whhcrzdysz6uk7
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml 
version: "3.0"

expectations:
  population_size: 1000

actions:
  query:
    run: >
      sqlrunner:latest
        --output output/rows.csv
        analysis/query.sql
    outputs:
      highly_sensitive:
        rows: output/rows.csv

  wrangle:
    needs: [query]
    run: >
      python:latest
        analysis/wrangle.py
    outputs:
      moderately_sensitive:
        results: output/appointment_id_processed.csv

  query_date_range:
    run: >
      sqlrunner:latest
        --output output/date_range/rows.csv
        analysis/date_range/query.sql
    outputs:
      highly_sensitive:
        rows: output/date_range/rows.csv

  wrangle_date_range:
    needs: [query_date_range]
    run: >
      python:latest python -m analysis.date_range.wrangle
    outputs:
      moderately_sensitive:
        results: output/date_range/results.csv

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:00:38

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
appointments-short-data-report
Requested by
Iain Dillingham
Branch
main
Force run dependencies
No
Git commit hash
27a114b
Requested actions
  • wrangle_date_range

Code comparison

Compare the code used in this job request