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Job request: 12855

Organisation:
Bennett Institute
Workspace:
appointments-short-data-report
ID:
xhbqivbjexpwkwrh
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Iain Dillingham requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

Pipeline

Show project.yaml 
version: "3.0"

expectations:
  population_size: 1000

actions:
  query_distinct_values:
    run: >
      sqlrunner:latest
        --output output/distinct_values/rows.csv
        analysis/distinct_values/query.sql
    outputs:
      highly_sensitive:
        rows: output/distinct_values/rows.csv

  wrangle_distinct_values:
    needs: [query_distinct_values]
    run: >
      python:latest python -m analysis.distinct_values.wrangle
    outputs:
      moderately_sensitive:
        results: output/distinct_values/results.csv

  query_date_range:
    run: >
      sqlrunner:latest
        --output output/date_range/rows.csv
        analysis/date_range/query.sql
    outputs:
      highly_sensitive:
        rows: output/date_range/rows.csv

  wrangle_date_range:
    needs: [query_date_range]
    run: >
      python:latest python -m analysis.date_range.wrangle
    outputs:
      moderately_sensitive:
        results: output/date_range/results.csv

  query_num_rows_by_month:
    run: >
      sqlrunner:latest
        --output output/num_rows_by_month/rows.csv
        analysis/num_rows_by_month/query.sql
    outputs:
      highly_sensitive:
        rows: output/num_rows_by_month/rows.csv

  wrangle_num_rows_by_month:
    needs: [query_num_rows_by_month]
    run: >
      python:latest python -m analysis.num_rows_by_month.wrangle
    outputs:
      moderately_sensitive:
        results: output/num_rows_by_month/results.csv

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 01:52:45

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Succeeded
Backend
TPP
Workspace
appointments-short-data-report
Requested by
Iain Dillingham
Branch
main
Force run dependencies
Yes
Git commit hash
d565433
Requested actions
  • wrangle_num_rows_by_month

Code comparison

Compare the code used in this Job Request