This page shows the technical details of what happened when authorised researcher Alex Walker requested one or more actions to be run against real patient data in the project, within a secure environment.
By cross-referencing the indicated Requested Actions with the
Pipeline section below, you can infer what
security level
various outputs were written to. Outputs marked as
highly_sensitive
can never be viewed directly by a researcher; they can only
request that code runs against them. Outputs marked as
moderately_sensitive
can be viewed by an approved researcher by logging into a highly
secure environment. Only outputs marked as
moderately_sensitive
can be requested for release to the public, via a controlled
output review service.
Jobs
-
- Job identifier:
-
sxfq4rbxwps44yvg
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- Job identifier:
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lxs7te6revty2joq
Pipeline
Show project.yaml
version: '3.0'
expectations:
population_size: 2000
actions:
generate_cohort:
run: cohortextractor:latest generate_cohort --study-definition study_definition_cohort
outputs:
highly_sensitive:
cohort: output/input_cohort.csv
count_by_strata:
run: python:latest python analysis/all_time_counts.py
needs: [generate_cohort]
outputs:
moderately_sensitive:
table: output/counts_table.csv
practice_distribution: output/practice_distribution.csv
per_week: output/code_use_per_week_long_covid.csv
per_week_pvf: output/code_use_per_week_post_viral_fatigue.csv
code_table: output/all_long_covid_codes.csv
practice_summ: output/practice_summ.txt
Timeline
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Created:
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Started:
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Finished:
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Runtime: 00:53:05
These timestamps are generated and stored using the UTC timezone on the backend.
Job information
- Status
-
Failed
Completed successfully
- Backend
- EMIS
- Workspace
- long-covid-emis
- Requested by
- Alex Walker
- Branch
- EMIS
- Force run dependencies
- Yes
- Git commit hash
- 01d942c
- Requested actions
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-
run_all
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