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Job request: 14986

Organisation:
Nuffield Trust
Workspace:
deaths-at-home-during-covid-19-validation
ID:
sg7fdrb7h6cjehxa
View repo View project.yaml

This page shows the technical details of what happened when authorised researcher Jon Massey requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the indicated Requested Actions with the Pipeline section below, you can infer what security level various outputs were written to. Outputs marked as highly_sensitive can never be viewed directly by a researcher; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    run_all
    Status:
    Status: Succeeded
    Job identifier:
    nggtk5y7ce5ao2jy

Pipeline

Show project.yaml 
version: '3.0'

expectations:
  population_size: 10000

actions:

  generate_medication_codelist_comprison_dataset:
    run: >
      databuilder:v0
        generate-dataset analysis/dataset_definition.py
        --output output/dataset.csv
    outputs:
      highly_sensitive:
        cohort: output/dataset.csv

  validate_medication_codelist_counts:
    run: >
      python:latest
        python analysis/validate_prescription_counts.py
    needs: [generate_medication_codelist_comprison_dataset]
    outputs:
      moderately_sensitive:
        totals: output/validation_totals.csv

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime:

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Succeeded
Backend
TPP
Workspace
deaths-at-home-during-covid-19-validation
Requested by
Jon Massey
Branch
validation
Force run dependencies
No
Git commit hash
ab74ffb
Requested actions
  • run_all

Code comparison

Compare the code used in this Job Request