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Job request: 2944

Organisation:
Bennett Institute
Workspace:
ethnicity-short-data-report-test
ID:
d7nnlxphkuimlpll
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Rohini Mathur requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

Pipeline

Show project.yaml 
version: '3.0'

expectations:
  population_size: 1000

actions:

  generate_cohorts:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv

  initial_counts:
    run: stata-mp:latest analysis/00_describe_snomed_ethnicity.do
    needs: [generate_cohorts]
    outputs:
      highly_sensitive:
        data: output/snomed_ethnicity_counts.dta
      moderately_sensitive:
        log: logs/00_describe_snomed_ethnicity.log

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 158:48:37

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Workspace
ethnicity-short-data-report-test
Requested by
Rohini Mathur
Branch
write-study-def
Force run dependencies
No
Git commit hash
1117685
Requested actions
  • run_all

Code comparison

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