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Job request: 2689

Organisation:
Bennett Institute
Workspace:
immunosuppressant-meds-research
ID:
tcrttlfvaanhpr5o
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Nick Kennedy requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    run_cox_models_standinflix
    Status:
    Succeeded
    Job identifier:
    infk7xnsyie2226r
  • Action:
    run_cox_models_standtnf3m
    Status:
    Succeeded
    Job identifier:
    lgagwb2qjm2yjr26
  • Action:
    run_cox_models_standil6
    Status:
    Succeeded
    Job identifier:
    qawz7d4ngv5lsfs7
  • Action:
    run_cox_models_joint
    Status:
    Failed
    Job identifier:
    zn5m2v6npnvsgxsg
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    run_cox_models_standil17
    Status:
    Succeeded
    Job identifier:
    fagtynq3zwdo4gaz
  • Action:
    run_cox_models_standtnf
    Status:
    Succeeded
    Job identifier:
    czbqu5ok3fur5omc
  • Action:
    run_cox_models_standritux
    Status:
    Succeeded
    Job identifier:
    b25cnkaqumfv44ft
  • Action:
    run_cox_models_standjaki
    Status:
    Succeeded
    Job identifier:
    x2zoej3sm6vc7y3u
  • Action:
    run_cox_models_tnfmono
    Status:
    Succeeded
    Job identifier:
    5km323bxaydzpvkt
  • Action:
    run_cox_models_bowel
    Status:
    Failed
    Job identifier:
    jgbkrtuvk6z5ygda
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    run_cox_models_standil23
    Status:
    Succeeded
    Job identifier:
    maygmsknx7a7kkxq
  • Action:
    run_cox_models_imid
    Status:
    Failed
    Job identifier:
    gruh77nkyohm4igh
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    run_cox_models_imiddrugcategory
    Status:
    Succeeded
    Job identifier:
    zv4d5jf35veeaf6s
  • Action:
    run_export_csv
    Status:
    Failed
    Job identifier:
    yipvwrjzawad5uc3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    run_outcomes_check
    Status:
    Failed
    Job identifier:
    uto7gqcmhomqtg22
    Error:
    Internal error when starting job
  • Action:
    run_schoenfeld
    Status:
    Failed
    Job identifier:
    n3h4gjel6hwoc2eq
    Error:
    Internal error when starting job
  • Action:
    run_cox_models_skin
    Status:
    Failed
    Job identifier:
    5kqsgzhe7exnaoh6
    Error:
    Internal error when starting job
  • Action:
    run_forest_plots
    Status:
    Failed
    Job identifier:
    hgy4c6erqoxk7wkf
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 130:13:42

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
immunosuppressant-meds-research
Requested by
Nick Kennedy
Branch
master
Force run dependencies
No
Git commit hash
e85aa30
Requested actions
  • run_cox_models_imid
  • run_cox_models_joint
  • run_cox_models_skin
  • run_cox_models_bowel
  • run_cox_models_imiddrugcategory
  • run_cox_models_standtnf
  • run_cox_models_standtnf3m
  • run_cox_models_tnfmono
  • run_cox_models_standil6
  • run_cox_models_standil17
  • run_cox_models_standil23
  • run_cox_models_standjaki
  • run_cox_models_standritux
  • run_cox_models_standinflix
  • run_schoenfeld
  • run_outcomes_check
  • run_export_csv
  • run_forest_plots

Code comparison

Compare the code used in this job request