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Job request: 4309

Organisation:
Bennett Institute
Workspace:
immunosuppressant-meds-research
ID:
s4xxl7jaogggx52m
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Nick Kennedy requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    create_cohorts
    Status:
    Status: Succeeded
    Job identifier:
    4p2srhcs3ll3wo3i
  • Action:
    run_cox_spline_standabatacept
    Status:
    Status: Failed
    Job identifier:
    y6mqpld7oiw26a7s
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    run_cox_models_standvedolizumab
    Status:
    Status: Failed
    Job identifier:
    dfqlqa6eru3is6fx
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    run_cox_models_standabatacept
    Status:
    Status: Failed
    Job identifier:
    nm6xyofiplto6tr5
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    run_baseline_tables
    Status:
    Status: Failed
    Job identifier:
    dspkblqkzjxul66t
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    run_schoenfeld
    Status:
    Status: Failed
    Job identifier:
    oqzwrvi2spx36wjj
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    run_cox_spline_standvedolizumab
    Status:
    Status: Failed
    Job identifier:
    k3agdintsh6hdupd
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    run_outcomes_check
    Status:
    Status: Succeeded
    Job identifier:
    zjlorfp6vge7wnhv
  • Action:
    run_spline_export_csv
    Status:
    Status: Failed
    Job identifier:
    nje6exjlmpdjdgoy
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    run_forest_plots
    Status:
    Status: Failed
    Job identifier:
    dquxtpw7z3jcynsi
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    run_extract_n_subjects
    Status:
    Status: Failed
    Job identifier:
    7b5mcee4ncqwonkx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    run_merge_csvs_spline
    Status:
    Status: Failed
    Job identifier:
    kafd3uze3mta52dq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    run_export_csv
    Status:
    Status: Failed
    Job identifier:
    tdfw7fq2bajfw54s
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 08:06:15

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Workspace
immunosuppressant-meds-research
Requested by
Nick Kennedy
Branch
master
Force run dependencies
No
Git commit hash
6653b46
Requested actions
  • create_cohorts
  • run_baseline_tables
  • run_cox_models_standvedolizumab
  • run_cox_models_standabatacept
  • run_cox_spline_standvedolizumab
  • run_cox_spline_standabatacept
  • run_spline_export_csv
  • run_schoenfeld
  • run_outcomes_check
  • run_export_csv
  • run_forest_plots
  • run_merge_csvs_spline
  • run_extract_n_subjects

Code comparison

Compare the code used in this Job Request