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Job request: 4574

Organisation:
Bennett Institute
Workspace:
immunosuppressant-meds-research
ID:
ltnzzara3feghigq
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Nick Kennedy requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    run_cox_models_imid_ethnicity_4
    Status:
    Status: Failed
    Job identifier:
    e72ysgxtbco33crj
    Error:
    Failed to start docker container: Command '['docker', 'run', '--init', '--detach', '--label', 'job-runner', '--name', 'os-job-e72ysgxtbco33crj', '--network', 'none', '--volume', 'os-volume-e72ysgxtbco33crj:/workspace', '--label', 'jobrunner-local', '--label', 'workspace=immunosuppressant-meds-research', '--label', 'action=run_cox_models_imid_ethnicity_4', '--env', 'OPENSAFELY_BACKEND', '--env', 'STATA_LICENSE', 'ghcr.io/opensafely-core/stata-mp:latest', 'analysis/500_cox_models_ethnic.do', 'imid', '4']' returned non-zero exit status 125.
  • Action:
    run_cox_models_imid_ethnicity_3
    Status:
    Status: Failed
    Job identifier:
    b7rsvre7u733qmlv
    Error:
    Internal error
  • Action:
    run_cox_models_imid_ethnicity_u
    Status:
    Status: Failed
    Job identifier:
    d3bedeil55w64ya6
    Error:
    Failed to start docker container: Command '['docker', 'run', '--init', '--detach', '--label', 'job-runner', '--name', 'os-job-d3bedeil55w64ya6', '--network', 'none', '--volume', 'os-volume-d3bedeil55w64ya6:/workspace', '--label', 'jobrunner-local', '--label', 'workspace=immunosuppressant-meds-research', '--label', 'action=run_cox_models_imid_ethnicity_u', '--env', 'OPENSAFELY_BACKEND', '--env', 'STATA_LICENSE', 'ghcr.io/opensafely-core/stata-mp:latest', 'analysis/500_cox_models_ethnic.do', 'imid', 'u']' returned non-zero exit status 125.
  • Action:
    run_cox_models_imid_ethnicity_5
    Status:
    Status: Failed
    Job identifier:
    iwygsvdqsgzj5wak
    Error:
    Internal error
  • Action:
    run_cox_models_imid_ethnicity_1
    Status:
    Status: Failed
    Job identifier:
    lpzuyajvooqto6fa
    Error:
    Internal error
  • Action:
    run_cox_models_imid_ethnicity_2
    Status:
    Status: Failed
    Job identifier:
    ebnphqkvedvn24wf
    Error:
    Internal error

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 02:13:25

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
immunosuppressant-meds-research
Requested by
Nick Kennedy
Branch
master
Force run dependencies
No
Git commit hash
1bae1b8
Requested actions
  • run_cox_models_imid_ethnicity_1
  • run_cox_models_imid_ethnicity_2
  • run_cox_models_imid_ethnicity_3
  • run_cox_models_imid_ethnicity_4
  • run_cox_models_imid_ethnicity_5
  • run_cox_models_imid_ethnicity_u

Code comparison

Compare the code used in this job request