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Job request: 24703

Organisation:
Bennett Institute
Workspace:
wp3_predicting_pressures
ID:
2ir2j7lbxhsc36md
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Shrinkhala Dawadi requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

Pipeline

Show project.yaml 
version: '4.0'

actions:
  generate_measures:
    run: ehrql:v1 generate-measures analysis/measures_definition.py --output output/measures.csv
    outputs:
      moderately_sensitive:
        dataset: output/measures.csv

  generate_dataset:
    run: ehrql:v1 generate-dataset analysis/dataset_definition.py --output output/dataset.csv
    outputs:
      highly_sensitive:
        dataset: output/dataset.csv

  merge_dataset:
    run: r:latest analysis/data_management.R
    needs: [generate_dataset, generate_measures]
    outputs:
      moderately_sensitive:
        dataset: output/merged_data.csv
        #dataset2: output/practice_subset_list.csv

  # generate_graphs:
  #   run: r:latest analysis/data_management.R
  #   needs: [generate_dataset, generate_measures]
  #   outputs:
  #     moderately_sensitive:
  #       chart: output/total_gp_appts.png

  # generate_graphs:
  #   run: r:latest analysis/graphs.R
  #   needs: [merge_dataset]
  #   outputs:
  #     moderately_sensitive:
  #       chart: output/total_gp_appts.png

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 32:18:12

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Succeeded
Backend
TPP
Workspace
wp3_predicting_pressures
Requested by
Shrinkhala Dawadi
Branch
main
Force run dependencies
No
Git commit hash
a72c672
Requested actions
  • run_all

Code comparison

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