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Job request: 5919

Organisation:
NICE
Workspace:
nice-audit-bp
ID:
soveeshk7zjy2bji
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Robert Willans requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

Pipeline

Show project.yaml 
version: "3.0"

expectations:
  population_size: 1000

actions:
  generate_study_population:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv
    ## note: when running studies for real it is recommended to add the option --output-format='csv.gz' to the run command, 
    ## and add '.gz' to the output file path, to produce the output in compressed form to reduce file size.

  # describe:
  #   run: r:latest analysis/report.R
  #   needs: [generate_study_population]
  #   outputs:
  #     moderately_sensitive:
  #       cohort:

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 03:01:03

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Succeeded
Backend
TPP
Workspace
nice-audit-bp
Requested by
Robert Willans
Branch
main
Force run dependencies
Yes
Git commit hash
03a0a88
Requested actions
  • generate_study_population
  • run_all

Code comparison

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