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Job request: 24865

Organisation:
University of Bristol
Workspace:
metformin-covid-main
ID:
q3kw3267u74zypwa

This page shows the technical details of what happened when the authorised researcher Alain Amstutz requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    generate_dataset
    Status:
    Status: Succeeded
    Job identifier:
    cu6xa42ywct7al6p
  • Action:
    data_process
    Status:
    Status: Succeeded
    Job identifier:
    bdgp6n5ewvuydrmo
  • Action:
    cox_longvirfat
    Status:
    Status: Succeeded
    Job identifier:
    p4eepwpv6aoj3cw3
  • Action:
    cox_neg_control_landmark
    Status:
    Status: Succeeded
    Job identifier:
    bh4svtrqsmc5zfd2
  • Action:
    cox_covid_event
    Status:
    Status: Succeeded
    Job identifier:
    sunzkaengtpd5arj
  • Action:
    cox_pos_control_pandemic
    Status:
    Status: Failed
    Job identifier:
    2xf2heuebbkutvlp
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_neg_control_pandemic
    Status:
    Status: Succeeded
    Job identifier:
    ctpd3uk67yhg3qqy
  • Action:
    cox_pos_control_landmark
    Status:
    Status: Failed
    Job identifier:
    bgyymstmh3wg32jk
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_primary_scripted
    Status:
    Status: Succeeded
    Job identifier:
    yz5j3avgpqma6b5s
  • Action:
    cox_primary
    Status:
    Status: Succeeded
    Job identifier:
    votxwtsvi6i6zjaa
  • Action:
    km_primary
    Status:
    Status: Succeeded
    Job identifier:
    nvtp6shzfqlgzly6
  • Action:
    prep_sg
    Status:
    Status: Succeeded
    Job identifier:
    a7agav7afpld3yqx
  • Action:
    ps
    Status:
    Status: Succeeded
    Job identifier:
    bfllxecuj5g7vm6f
  • Action:
    table1
    Status:
    Status: Succeeded
    Job identifier:
    qblkv4uaykmxqqqq
  • Action:
    cox_sg_below60
    Status:
    Status: Succeeded
    Job identifier:
    q27q3hd3ztkjstgc
  • Action:
    cox_sg_60orabove
    Status:
    Status: Succeeded
    Job identifier:
    mgymzwaaspemsqnr
  • Action:
    baseline_tables
    Status:
    Status: Succeeded
    Job identifier:
    npcuvrfvc6ooj4dy
  • Action:
    cox_sg_HbA1c59orabove
    Status:
    Status: Succeeded
    Job identifier:
    zajkkpwxojz4zqte
  • Action:
    cox_sg_female
    Status:
    Status: Succeeded
    Job identifier:
    gqpdoskgwbe7vb43
  • Action:
    cox_sg_imd1
    Status:
    Status: Succeeded
    Job identifier:
    wxa7eglcrnfm73h6
  • Action:
    cox_sg_belowHbA1c59
    Status:
    Status: Succeeded
    Job identifier:
    2oyxqftktle3uqmp
  • Action:
    cox_sg_nonimd1
    Status:
    Status: Succeeded
    Job identifier:
    24htlgdhe52v57un
  • Action:
    cox_sg_male
    Status:
    Status: Succeeded
    Job identifier:
    3wy4tpnejssn46kn
  • Action:
    cox_sg_nonwhite
    Status:
    Status: Succeeded
    Job identifier:
    j2isukywkwo6g7ri
  • Action:
    cox_sg_nonobese
    Status:
    Status: Succeeded
    Job identifier:
    ghl7nwl533nwriji
  • Action:
    cox_sg_white
    Status:
    Status: Succeeded
    Job identifier:
    l4hn7bo2ziviyz4t
  • Action:
    cox_sg_obese
    Status:
    Status: Succeeded
    Job identifier:
    spqjurh7mt23jths

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 12:10:04

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Requested by
Alain Amstutz
Branch
main
Force run dependencies
No
Git commit hash
5accbab
Requested actions
  • generate_dataset
  • data_process
  • table1
  • km_primary
  • cox_primary_scripted
  • ps
  • cox_primary
  • cox_covid_event
  • cox_longvirfat
  • baseline_tables
  • cox_neg_control_landmark
  • cox_neg_control_pandemic
  • cox_pos_control_landmark
  • cox_pos_control_pandemic
  • prep_sg
  • cox_sg_below60
  • cox_sg_60orabove
  • cox_sg_female
  • cox_sg_male
  • cox_sg_white
  • cox_sg_nonwhite
  • cox_sg_imd1
  • cox_sg_nonimd1
  • cox_sg_obese
  • cox_sg_nonobese
  • cox_sg_belowHbA1c59
  • cox_sg_HbA1c59orabove

Code comparison

Compare the code used in this Job Request