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Job request: 26697

Organisation:
University of Bristol
Workspace:
metformin-covid-main
ID:
j5ixrytl2h27bpnp
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Alain Amstutz requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_dataset
    Status:
    Succeeded
    Job identifier:
    fi2dqht4gk7pisri
  • Action:
    data_process
    Status:
    Succeeded
    Job identifier:
    fhlmyvjajpuardrk
  • Action:
    PPA_01_add_intervals
    Status:
    Succeeded
    Job identifier:
    brjx3tgkwavjphzr
  • Action:
    cox_covid_event
    Status:
    Succeeded
    Job identifier:
    jiumygueoc4s6qvk
  • Action:
    cox_neg_control_landmark
    Status:
    Succeeded
    Job identifier:
    gh7sptt3t3agvo2g
  • Action:
    cox_neg_control_pandemic
    Status:
    Succeeded
    Job identifier:
    fs5vyuru43xf3dpt
  • Action:
    cox_pos_control_landmark
    Status:
    Succeeded
    Job identifier:
    ubod5gmyqyyn4mzm
  • Action:
    cox_pos_control_pandemic
    Status:
    Succeeded
    Job identifier:
    2vvvqwrfqnzi2i5t
  • Action:
    cox_primary
    Status:
    Succeeded
    Job identifier:
    g2w462w4udcwcncd
  • Action:
    cox_primary_scripted
    Status:
    Succeeded
    Job identifier:
    annjwhymsp4qbss4
  • Action:
    km_covid_event
    Status:
    Succeeded
    Job identifier:
    mn2foinujvhgpbsz
  • Action:
    km_primary
    Status:
    Succeeded
    Job identifier:
    f7bo42irbopdfkqn
  • Action:
    km_primary_weighted
    Status:
    Succeeded
    Job identifier:
    mnti5p4usqckjvb3
  • Action:
    PPA_02_add_events
    Status:
    Succeeded
    Job identifier:
    e64w3m7xzflarhpr
  • Action:
    prep_sg
    Status:
    Succeeded
    Job identifier:
    5f5uwgr3qvwn7mxy
  • Action:
    ps
    Status:
    Succeeded
    Job identifier:
    ihfoy4jdjdq3ftch
  • Action:
    cox_primary_ps_overlap
    Status:
    Succeeded
    Job identifier:
    jhfeaiptwve5hbrm
  • Action:
    cox_sg_60orabove
    Status:
    Succeeded
    Job identifier:
    vh2bn77tqozz6cna
  • Action:
    cox_sg_HbA1c59orabove
    Status:
    Succeeded
    Job identifier:
    eidmnbxjloen5nd4
  • Action:
    cox_sg_HbA1c59orabove_pos_control
    Status:
    Succeeded
    Job identifier:
    lubrw46i7qgzap3i
  • Action:
    cox_sg_below60
    Status:
    Succeeded
    Job identifier:
    wiqdyv2npkgsmd3r
  • Action:
    cox_sg_belowHbA1c59
    Status:
    Succeeded
    Job identifier:
    nabs4ypkivorem4d
  • Action:
    cox_sg_belowHbA1c59_pos_control
    Status:
    Succeeded
    Job identifier:
    ibzhi43v6cn6euss
  • Action:
    cox_sg_female
    Status:
    Succeeded
    Job identifier:
    przqo2gy7ivurlvt
  • Action:
    cox_sg_imd1
    Status:
    Succeeded
    Job identifier:
    2m7gvmy2w227ahd4
  • Action:
    cox_sg_male
    Status:
    Succeeded
    Job identifier:
    6wvhonai27lnqxtb
  • Action:
    cox_sg_nonimd1
    Status:
    Succeeded
    Job identifier:
    4n67hfvsgx5ruu4p
  • Action:
    cox_sg_nonwhite
    Status:
    Succeeded
    Job identifier:
    ra6gypc355snpy3k
  • Action:
    cox_sg_normlowmissing
    Status:
    Succeeded
    Job identifier:
    bjemkrmq2bku5cgu
  • Action:
    cox_sg_obese
    Status:
    Succeeded
    Job identifier:
    w3hjwujtnjm5hlps
  • Action:
    cox_sg_overweight
    Status:
    Succeeded
    Job identifier:
    zw3oigpej6igfvr7
  • Action:
    cox_sg_white
    Status:
    Succeeded
    Job identifier:
    u6bsw3e2cfo2c6hs
  • Action:
    make_model_output
    Status:
    Succeeded
    Job identifier:
    ojsysjo44fjxdqgr
  • Action:
    table1
    Status:
    Succeeded
    Job identifier:
    p2vdc6635mnzx74b
  • Action:
    PPA_03_pooled_log_reg_no_interaction
    Status:
    Running
    Job identifier:
    iyujq4qft6xjuwbj
  • Action:
    PPA_03_pooled_log_reg_with_interaction
    Status:
    Running
    Job identifier:
    en2haah6k7rvhp4l

Pipeline

Show project.yaml
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Job statistics

Status Count Percentage
Pending 0 0%
Running 2 5.6%
Succeeded 34 94.4%
Failed 0 0%

34 / 36 (94.4%) complete

Timeline

  • Created:

  • Started:

  • Runtime: 24:52:32

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Running
Backend
TPP
Workspace
metformin-covid-main
Requested by
Alain Amstutz
Branch
main
Force run dependencies
No
Git commit hash
e693b22
Requested actions
  • generate_dataset
  • data_process
  • table1
  • km_primary
  • km_covid_event
  • cox_primary_scripted
  • ps
  • cox_primary
  • cox_primary_ps_overlap
  • cox_covid_event
  • cox_neg_control_landmark
  • cox_neg_control_pandemic
  • cox_pos_control_landmark
  • cox_pos_control_pandemic
  • prep_sg
  • cox_sg_below60
  • cox_sg_60orabove
  • cox_sg_female
  • cox_sg_male
  • cox_sg_white
  • cox_sg_nonwhite
  • cox_sg_imd1
  • cox_sg_nonimd1
  • cox_sg_obese
  • cox_sg_overweight
  • cox_sg_normlowmissing
  • cox_sg_HbA1c59orabove
  • cox_sg_belowHbA1c59
  • cox_sg_HbA1c59orabove_pos_control
  • cox_sg_belowHbA1c59_pos_control
  • make_model_output
  • PPA_01_add_intervals
  • PPA_02_add_events
  • PPA_03_pooled_log_reg_with_interaction
  • PPA_03_pooled_log_reg_no_interaction
  • km_primary_weighted

Code comparison

Compare the code used in this job request