Job request: 26485
- Organisation:
- University of Bristol
- Workspace:
- post-covid-cvd-missingness-methods-v1
- ID:
- p3rlsnatk2hubddu
This page shows the technical details of what happened when the authorised researcher Emma Tarmey requested one or more actions to be run against real patient data within a secure environment.
By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.
The output security levels are:
-
highly_sensitive
- Researchers can never directly view these outputs
- Researchers can only request code is run against them
-
moderately_sensitive
- Can be viewed by an approved researcher by logging into a highly secure environment
- These are the only outputs that can be requested for public release via a controlled output review service.
Jobs
-
- Action:
- study_dates
- Status:
- Succeeded
- Job identifier:
-
ynfscako2yclocso
-
- Action:
- generate_dates
- Status:
- Succeeded
- Job identifier:
-
74s3kallzkzzdiil
-
- Action:
- generate_input_prevax
- Status:
- Succeeded
- Job identifier:
-
oygv3lt7pr2uwzei
-
- Action:
- generate_input_prevax_clean
- Status:
- Succeeded
- Job identifier:
-
oz5z7ycykncm3i3t
-
- Action:
- table_missingness_cohort_prevax
- Status:
- Succeeded
- Job identifier:
-
ibhf3uqdamcgpf6a
-
- Action:
- apply_across_MI_cohort_prevax
- Status:
- Running
- Job identifier:
-
3fom4zzptkhyebgo
-
- Action:
- make_lasso_cox_model-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
4dtavwm4akuylpye - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_cox_model-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
vajyw3oqngfdbhic - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_cox_ipw-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
xeu27haeouohgs4j - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_model_output-main
- Status:
- Pending
- Job identifier:
-
kfxudfas73nwudfy - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_union_model_output-sub_covidhospital
- Status:
- Pending
- Job identifier:
-
nwzwbdf5c36sls6w - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make-table1-output
- Status:
- Pending
- Job identifier:
-
t5gswskjnqmfvwwc - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
cbpcdqnjkl6pfoqo - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
c6blnkublnrqptgo - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_cox_model-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
4qnaivnz5p2vtovt - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_cox_ipw-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
ewyzphrcrg5sulph - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_X_model_output-sub_covidhospital
- Status:
- Pending
- Job identifier:
-
pqe64wjn4wieq5hk - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input_subsample-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
elzkb3firz65uule - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_var_selection-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
vkubqkjwkqe33pto - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_cox_model-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
pkbwva5j4swqq7lw - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_cox_model-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
m3w2v2bpxa5ckkdw - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_cox_ipw-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
2chq2noy4xrhebng - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_cox_ipw-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
dxmzaq72r52x32mz - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_X_model_output-main
- Status:
- Pending
- Job identifier:
-
jbbidrp2qyurrk64 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_union_model_output-main
- Status:
- Pending
- Job identifier:
-
3avsnqkn4r563drj - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- table1-cohort_prevax
- Status:
- Pending
- Job identifier:
-
jyessgi5qhfb7sdb - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- variable_selection_output-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
5yd6jgc4uwjanciv - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_cox_model-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
tp7mvk7rb74sfuqd - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_lasso_model_output-sub_covidhospital
- Status:
- Pending
- Job identifier:
-
fftvrmnkebhllaey - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_output-main
- Status:
- Pending
- Job identifier:
-
vcr52zdkjv3nkwe7 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- generate_subsample_cohort_prevax
- Status:
- Pending
- Job identifier:
-
dxanlngcgi6nsveu - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- table1-cohort_prevax_subsample
- Status:
- Pending
- Job identifier:
-
ytdckizqqoc4zebl - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
c7hwno4jr33qgmk2 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_cox_ipw-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
k3n4kbko5wzb5kt2 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- unconfoundedness_test-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
kdlsnjqi2nxujcki - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- unconfoundedness_test-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
rlc5vrpq7bvj4hr2 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- variable_selection_output-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
xsj4zyjn33x26wgs - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- variable_selection_output-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
rjyyjyoudrsej45t - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- table2-cohort_prevax-sub_covidhospital
- Status:
- Pending
- Job identifier:
-
mrnxdmfrujlylweg - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_var_selection-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
fe5xys2knu6uv34x - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_var_selection-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
ygscktsih44e3qo5 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_cox_ipw-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
rtdvtnvruwnykrsk - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make-table2-sub_covidhospital-output
- Status:
- Pending
- Job identifier:
-
szxjt72d6oj2x5xm - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- venn-cohort_prevax
- Status:
- Pending
- Job identifier:
-
nbdzm25fxilipz6v - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_var_selection-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
xmc4wdwciq22ly6s - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_var_selection-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
yeebljyhrqtiri44 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_output-sub_covidhospital
- Status:
- Pending
- Job identifier:
-
2akoysub7tiee5z3 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- unconfoundedness_test-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
amzard4swwnxkdtc - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- unconfoundedness_test-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
3w4ae2ecy4lbv34p - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- variable_selection_output-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
fyda2ifwaxpu5ibf - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_var_selection-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
mvjrt6vbu6i5t2nu - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_var_selection-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
dfvwyhtetiifcdnd - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- unconfoundedness_test-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
qpfrrltgeygn4zuv - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- unconfoundedness_test-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
tfbwbijzmaibtot2 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- variable_selection_output-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
votu5tthzpk4e2zb - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_var_selection-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
zw24evrma3r5fcds - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_var_selection-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
drg3p5urcd57dr42 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_var_selection-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
5y2tontwxz4oo3uf - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_cox_ipw-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
pzvtw76bulxnlbhd - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_var_selection-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
qul4gbr5iem5i43y - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_cox_ipw-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
gniunrd2p57iqncn - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_cox_ipw-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
xgw34wpbeunwb3gi - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_var_selection-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
eqae2ceazzaaw2fw - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_var_selection-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
potco3e2e5ybflvi - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_var_selection-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
7sxokkrmorhiwytk - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input_subsample-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
77ofgjhp4dolaj25 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input_subsample-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
bno2ogfflkmryj55 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_var_selection-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
4uvcigrhikfxegkv - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- cox_ipw-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
xf22ib3e6k62372t - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input_subsample-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
wpwtli566kmkqejk - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input_subsample-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
4hf3u5d2bvgjyrup - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_var_selection-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
23vazils4hkgdb4h - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input_subsample-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
4qqzb7cuuejko7ss - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_var_selection-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
ks4jw37xkbfwfngz - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_cox_ipw-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
ttck4uiixtdkiji5 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_cox_ipw-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
ip5fzvcwv4jrkmxp - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- cox_ipw-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
x3ze7da5xjzjof2w - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_cox_ipw-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
yjpqa6dtr4rpccor - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_cox_ipw-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
zezoijoyz3qxeu7h - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- cox_ipw-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
5x5675izyekidjf2 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_cox_ipw-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
e46qao2fq5rqxl5g - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_cox_ipw-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
ookutpqb3qasfdof - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_cox_ipw-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
5dc6wbgtzboxqaua - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- cox_ipw-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
w7ianfkkgcp3pey4 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_cox_ipw-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
h2efvz7gn5j6ioq6 - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_union_cox_ipw-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
jvxxpiadp55aillw - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- cox_ipw-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
plnd7kqopnxm4vbu - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- variable_selection_output-cohort_prevax-main-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
wownwtth56kzxyxv - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- cox_ipw-cohort_prevax-sub_covidhospital_TRUE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
z5xdelaxnea37tmz - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input-cohort_prevax-sub_covidhospital_FALSE-ami
- Status:
- Pending
- Job identifier:
-
t3cg42p5qi47jsjm - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input-cohort_prevax-sub_covidhospital_TRUE-ami
- Status:
- Pending
- Job identifier:
-
if6kxdfjly2u4tup - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make-venn-output
- Status:
- Pending
- Job identifier:
-
vt4g6ufkb3njjz3o - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- lasso_X_var_selection-cohort_prevax-main-ami
- Status:
- Pending
- Job identifier:
-
2j3qmsyst5zw5hrm - Status message:
- waiting_on_dependencies: Waiting on dependencies
-
- Action:
- make_model_input-cohort_prevax-sub_covidhospital_FALSE-stroke_sahhs
- Status:
- Pending
- Job identifier:
-
33wfutn7kviernnz - Status message:
- waiting_on_dependencies: Waiting on dependencies
Pipeline
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Job statistics
| Status | Count | Percentage |
|---|---|---|
| Pending | 88 | 93.6% |
| Running | 1 | 1.1% |
| Succeeded | 5 | 5.3% |
| Failed | 0 | 0% |
5 / 94 (5.3%) complete
Timeline
-
Created:
-
Started:
-
Runtime: 23:41:24
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job request
- Status
-
Running
- Backend
- TPP
- Workspace
- post-covid-cvd-missingness-methods-v1
- Requested by
- Emma Tarmey
- Branch
- main
- Force run dependencies
- Yes
- Git commit hash
- 15eb71a
- Requested actions
-
-
run_all
-
Code comparison
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