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Job request: 23260

Organisation:
University of Bristol
Workspace:
booster-effectiveness-autumn-2022
ID:
i57dpig7ero2lv2q
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Paul Madley-Dowd requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    match_controlactual_riskscore_i_7
    Status:
    Succeeded
    Job identifier:
    4sgsckoxnkhgtppm
  • Action:
    extract_final_incremental_riskscore_i
    Status:
    Succeeded
    Job identifier:
    ub6lceera4bfe6cx
  • Action:
    coverage_incremental_riskscore_i
    Status:
    Succeeded
    Job identifier:
    r5gfqebxqa3tduzy
  • Action:
    flowchart_incremental_riskscore_i
    Status:
    Succeeded
    Job identifier:
    r6jd4dbtkpyjxlc6
  • Action:
    cox_adj_incremental_riskscore_i_agegroup_match_covidadmitted
    Status:
    Failed
    Job identifier:
    jn2amahoqjgknddm
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_agegroup_match_coviddeath
    Status:
    Failed
    Job identifier:
    yjmdq45zc6sgt4yc
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_agegroup_match_fracture
    Status:
    Failed
    Job identifier:
    pecqcgt6xtltn4r7
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_agegroup_match_noncoviddeath
    Status:
    Failed
    Job identifier:
    k5op74m5wre2syk4
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_all_covidadmitted
    Status:
    Failed
    Job identifier:
    ggsqfxvzoayvc5p6
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_all_coviddeath
    Status:
    Failed
    Job identifier:
    uybzazjwmmo6qxdo
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_all_fracture
    Status:
    Failed
    Job identifier:
    4z3aqngzk2qm4fhp
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_all_noncoviddeath
    Status:
    Failed
    Job identifier:
    wzuq35mpyk7sfnki
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_cv_covidadmitted
    Status:
    Failed
    Job identifier:
    utrpdl6kw6g74jl3
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_cv_coviddeath
    Status:
    Failed
    Job identifier:
    c4vrjkgig5x3tqfz
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_cv_fracture
    Status:
    Failed
    Job identifier:
    pfxzq5elq7uecwwa
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_adj_incremental_riskscore_i_cv_noncoviddeath
    Status:
    Failed
    Job identifier:
    2x47dbzklniskgxl
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_agegroup_match_covidadmitted
    Status:
    Failed
    Job identifier:
    7fxadyhzvt7gvxks
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_agegroup_match_coviddeath
    Status:
    Failed
    Job identifier:
    h7w57ovr5i3okac4
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_agegroup_match_fracture
    Status:
    Failed
    Job identifier:
    2zq26pbnwjxftag3
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_agegroup_match_noncoviddeath
    Status:
    Failed
    Job identifier:
    zv735gqv2dcvypin
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_all_covidadmitted
    Status:
    Failed
    Job identifier:
    623mzl244zvxg4u2
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_all_coviddeath
    Status:
    Failed
    Job identifier:
    2govfjucjkvrlumq
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_all_fracture
    Status:
    Failed
    Job identifier:
    jrruhkmhtne5ofcv
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_all_noncoviddeath
    Status:
    Failed
    Job identifier:
    txlvwx4qn3cqqhb4
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_cv_covidadmitted
    Status:
    Failed
    Job identifier:
    ogkytz5d2hetxo4b
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_cv_coviddeath
    Status:
    Failed
    Job identifier:
    q7wgmiybzlubxrs7
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_cv_fracture
    Status:
    Failed
    Job identifier:
    cmdeoundpwtl5cmw
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_unadj_incremental_riskscore_i_cv_noncoviddeath
    Status:
    Failed
    Job identifier:
    pzezvew5s22pthwg
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_agegroup_match_covidadmitted
    Status:
    Failed
    Job identifier:
    lqmoawpxajinmqbf
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_agegroup_match_coviddeath
    Status:
    Failed
    Job identifier:
    752znfdf4utnwolp
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_agegroup_match_fracture
    Status:
    Failed
    Job identifier:
    gymgkxzevc4d3zmw
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_agegroup_match_noncoviddeath
    Status:
    Failed
    Job identifier:
    k6jqheqjxzq6tzl5
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_all_covidadmitted
    Status:
    Failed
    Job identifier:
    65vwksuai7ivyf4t
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_all_coviddeath
    Status:
    Failed
    Job identifier:
    57g3fvakggcczcvj
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_all_fracture
    Status:
    Failed
    Job identifier:
    mv4xhiegkbsx6n5h
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_all_noncoviddeath
    Status:
    Failed
    Job identifier:
    uaxkzzkkbitc3kk7
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_cv_covidadmitted
    Status:
    Failed
    Job identifier:
    byo63yflrluzq5me
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_cv_coviddeath
    Status:
    Failed
    Job identifier:
    pjt7t35qha3bxjwi
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_cv_fracture
    Status:
    Failed
    Job identifier:
    xfcsl3owdypabvyg
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    km_incremental_riskscore_i_cv_noncoviddeath
    Status:
    Failed
    Job identifier:
    d74jdrd2yxjo6fwo
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    table1_incremental_riskscore_i
    Status:
    Succeeded
    Job identifier:
    3y3la3nph5mnounx
  • Action:
    combine_model_incremental_riskscore_i
    Status:
    Failed
    Job identifier:
    uxume2ucdfluvziy
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 08:23:22

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
booster-effectiveness-autumn-2022
Requested by
Paul Madley-Dowd
Branch
main
Force run dependencies
No
Git commit hash
b523d6c
Requested actions
  • match_controlactual_riskscore_i_7
  • coverage_incremental_riskscore_i
  • flowchart_incremental_riskscore_i
  • extract_final_incremental_riskscore_i
  • table1_incremental_riskscore_i
  • km_incremental_riskscore_i_all_covidadmitted
  • cox_unadj_incremental_riskscore_i_all_covidadmitted
  • cox_adj_incremental_riskscore_i_all_covidadmitted
  • km_incremental_riskscore_i_all_coviddeath
  • cox_unadj_incremental_riskscore_i_all_coviddeath
  • cox_adj_incremental_riskscore_i_all_coviddeath
  • km_incremental_riskscore_i_all_noncoviddeath
  • cox_unadj_incremental_riskscore_i_all_noncoviddeath
  • cox_adj_incremental_riskscore_i_all_noncoviddeath
  • km_incremental_riskscore_i_all_fracture
  • cox_unadj_incremental_riskscore_i_all_fracture
  • cox_adj_incremental_riskscore_i_all_fracture
  • km_incremental_riskscore_i_agegroup_match_covidadmitted
  • cox_unadj_incremental_riskscore_i_agegroup_match_covidadmitted
  • cox_adj_incremental_riskscore_i_agegroup_match_covidadmitted
  • km_incremental_riskscore_i_agegroup_match_coviddeath
  • cox_unadj_incremental_riskscore_i_agegroup_match_coviddeath
  • cox_adj_incremental_riskscore_i_agegroup_match_coviddeath
  • km_incremental_riskscore_i_agegroup_match_noncoviddeath
  • cox_unadj_incremental_riskscore_i_agegroup_match_noncoviddeath
  • cox_adj_incremental_riskscore_i_agegroup_match_noncoviddeath
  • km_incremental_riskscore_i_agegroup_match_fracture
  • cox_unadj_incremental_riskscore_i_agegroup_match_fracture
  • cox_adj_incremental_riskscore_i_agegroup_match_fracture
  • km_incremental_riskscore_i_cv_covidadmitted
  • cox_unadj_incremental_riskscore_i_cv_covidadmitted
  • cox_adj_incremental_riskscore_i_cv_covidadmitted
  • km_incremental_riskscore_i_cv_coviddeath
  • cox_unadj_incremental_riskscore_i_cv_coviddeath
  • cox_adj_incremental_riskscore_i_cv_coviddeath
  • km_incremental_riskscore_i_cv_noncoviddeath
  • cox_unadj_incremental_riskscore_i_cv_noncoviddeath
  • cox_adj_incremental_riskscore_i_cv_noncoviddeath
  • km_incremental_riskscore_i_cv_fracture
  • cox_unadj_incremental_riskscore_i_cv_fracture
  • cox_adj_incremental_riskscore_i_cv_fracture
  • combine_model_incremental_riskscore_i

Code comparison

Compare the code used in this job request