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Job request: 4808

Organisation:
University of Bristol
Workspace:
covid-ve-change-over-time--combine-jcvi-groups-in-model
ID:
y2ueuypck4t4334q

This page shows the technical details of what happened when the authorised researcher Elsie Horne requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    design
    Status:
    Status: Succeeded
    Job identifier:
    x6adw43ofd65nczg
  • Action:
    dummy_data
    Status:
    Status: Succeeded
    Job identifier:
    7mzfp4mqehztjonz
  • Action:
    generate_study_population
    Status:
    Status: Failed
    Job identifier:
    4gmno7eeu7sayp3p
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    data_eligible_ab
    Status:
    Status: Failed
    Job identifier:
    7t3a6izoqjmgd47t
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    data_2nd_vax_dates
    Status:
    Status: Failed
    Job identifier:
    qomlzlpgixrnn5lq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_2nd_vax_dates
    Status:
    Status: Failed
    Job identifier:
    kztzuftjs6qiy77a
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_eligible_cd
    Status:
    Status: Failed
    Job identifier:
    sm3a3aps27fowyte
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_outcomes_process
    Status:
    Status: Failed
    Job identifier:
    6hgb4wsvcfujl7jk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_comparisons_process
    Status:
    Status: Failed
    Job identifier:
    lbv73n7hq74ip2k3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_postest
    Status:
    Status: Failed
    Job identifier:
    hwalkbu6rj7rssyu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_postest
    Status:
    Status: Failed
    Job identifier:
    i4rzh36m33vhpdpr
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_covidadmitted
    Status:
    Status: Failed
    Job identifier:
    godiq3koqfgfzje3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_covidadmitted
    Status:
    Status: Failed
    Job identifier:
    33vikstfakfwpuwx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_coviddeath
    Status:
    Status: Failed
    Job identifier:
    rs7lqhpnwnvjo332
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_coviddeath
    Status:
    Status: Failed
    Job identifier:
    qvlugmvxapdzt7df
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_death
    Status:
    Status: Failed
    Job identifier:
    eallcsxnurbakd43
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_death
    Status:
    Status: Failed
    Job identifier:
    zmnmmllh2a2qjanz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_model_cox_BNT162b2
    Status:
    Status: Failed
    Job identifier:
    3cowqs6mls7exu67
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    tables_model_cox_BNT162b2
    Status:
    Status: Failed
    Job identifier:
    g7afkpeqqhwwltol
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_input_process
    Status:
    Status: Failed
    Job identifier:
    5zzjxvo4wc3xamru
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_long_process
    Status:
    Status: Failed
    Job identifier:
    vb3x4pps2226g74c
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 08:48:34

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Requested by
Elsie Horne
Branch
combine-jcvi-groups-in-model
Force run dependencies
No
Git commit hash
7d611eb
Requested actions
  • design
  • dummy_data
  • generate_study_population
  • data_input_process
  • data_long_process
  • data_eligible_ab
  • data_2nd_vax_dates
  • plot_2nd_vax_dates
  • data_eligible_cd
  • data_comparisons_process
  • data_outcomes_process
  • data_tte_process_BNT162b2_postest
  • apply_model_cox_BNT162b2_postest
  • data_tte_process_BNT162b2_covidadmitted
  • apply_model_cox_BNT162b2_covidadmitted
  • data_tte_process_BNT162b2_coviddeath
  • apply_model_cox_BNT162b2_coviddeath
  • data_tte_process_BNT162b2_death
  • apply_model_cox_BNT162b2_death
  • plot_model_cox_BNT162b2
  • tables_model_cox_BNT162b2

Code comparison

Compare the code used in this job request

  • No previous job request available for comparison