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Job request: 4808

Organisation:
University of Bristol
Workspace:
covid-ve-change-over-time--combine-jcvi-groups-in-model
ID:
y2ueuypck4t4334q

This page shows the technical details of what happened when the authorised researcher Elsie Horne requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    design
    Status:
    Status: Succeeded
    Job identifier:
    x6adw43ofd65nczg
  • Action:
    dummy_data
    Status:
    Status: Succeeded
    Job identifier:
    7mzfp4mqehztjonz
  • Action:
    generate_study_population
    Status:
    Status: Failed
    Job identifier:
    4gmno7eeu7sayp3p
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    data_eligible_ab
    Status:
    Status: Failed
    Job identifier:
    7t3a6izoqjmgd47t
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    data_2nd_vax_dates
    Status:
    Status: Failed
    Job identifier:
    qomlzlpgixrnn5lq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_2nd_vax_dates
    Status:
    Status: Failed
    Job identifier:
    kztzuftjs6qiy77a
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_eligible_cd
    Status:
    Status: Failed
    Job identifier:
    sm3a3aps27fowyte
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_outcomes_process
    Status:
    Status: Failed
    Job identifier:
    6hgb4wsvcfujl7jk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_comparisons_process
    Status:
    Status: Failed
    Job identifier:
    lbv73n7hq74ip2k3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_postest
    Status:
    Status: Failed
    Job identifier:
    hwalkbu6rj7rssyu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_postest
    Status:
    Status: Failed
    Job identifier:
    i4rzh36m33vhpdpr
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_covidadmitted
    Status:
    Status: Failed
    Job identifier:
    godiq3koqfgfzje3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_covidadmitted
    Status:
    Status: Failed
    Job identifier:
    33vikstfakfwpuwx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_coviddeath
    Status:
    Status: Failed
    Job identifier:
    rs7lqhpnwnvjo332
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_coviddeath
    Status:
    Status: Failed
    Job identifier:
    qvlugmvxapdzt7df
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_tte_process_BNT162b2_death
    Status:
    Status: Failed
    Job identifier:
    eallcsxnurbakd43
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_BNT162b2_death
    Status:
    Status: Failed
    Job identifier:
    zmnmmllh2a2qjanz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_model_cox_BNT162b2
    Status:
    Status: Failed
    Job identifier:
    3cowqs6mls7exu67
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    tables_model_cox_BNT162b2
    Status:
    Status: Failed
    Job identifier:
    g7afkpeqqhwwltol
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_input_process
    Status:
    Status: Failed
    Job identifier:
    5zzjxvo4wc3xamru
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_long_process
    Status:
    Status: Failed
    Job identifier:
    vb3x4pps2226g74c
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 08:48:34

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Requested by
Elsie Horne
Branch
combine-jcvi-groups-in-model
Force run dependencies
No
Git commit hash
7d611eb
Requested actions
  • design
  • dummy_data
  • generate_study_population
  • data_input_process
  • data_long_process
  • data_eligible_ab
  • data_2nd_vax_dates
  • plot_2nd_vax_dates
  • data_eligible_cd
  • data_comparisons_process
  • data_outcomes_process
  • data_tte_process_BNT162b2_postest
  • apply_model_cox_BNT162b2_postest
  • data_tte_process_BNT162b2_covidadmitted
  • apply_model_cox_BNT162b2_covidadmitted
  • data_tte_process_BNT162b2_coviddeath
  • apply_model_cox_BNT162b2_coviddeath
  • data_tte_process_BNT162b2_death
  • apply_model_cox_BNT162b2_death
  • plot_model_cox_BNT162b2
  • tables_model_cox_BNT162b2

Code comparison

Compare the code used in this Job Request

  • No previous Job Request available for comparison