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Job request: 4844

Organisation:
University of Bristol
Workspace:
covid-ve-change-over-time--combine-jcvi-groups-in-model
ID:
rpbpj2vutpa6caqr
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Elsie Horne requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    data_tte_process_both_death
    Status:
    Succeeded
    Job identifier:
    ogmfyd5zxnu777zn
  • Action:
    data_tte_process_ChAdOx_coviddeath
    Status:
    Succeeded
    Job identifier:
    waip2fp47toq7kvp
  • Action:
    data_tte_process_both_postest
    Status:
    Succeeded
    Job identifier:
    bocepctrjujtoj5f
  • Action:
    data_tte_process_both_coviddeath
    Status:
    Succeeded
    Job identifier:
    cui5j7chvjdbcq7l
  • Action:
    data_tte_process_both_covidadmitted
    Status:
    Succeeded
    Job identifier:
    65rvmhhwlv2vdvfw
  • Action:
    data_tte_process_ChAdOx_postest
    Status:
    Succeeded
    Job identifier:
    5fjkmursxrhdriyc
  • Action:
    data_tte_process_ChAdOx_covidadmitted
    Status:
    Succeeded
    Job identifier:
    z6ioclmdiflwhasd
  • Action:
    data_tte_process_ChAdOx_death
    Status:
    Succeeded
    Job identifier:
    toywd5dl4kywchii
  • Action:
    apply_model_cox_ChAdOx_coviddeath
    Status:
    Succeeded
    Job identifier:
    hwqmv7mfmsvl75vw
  • Action:
    apply_model_cox_ChAdOx_covidadmitted
    Status:
    Succeeded
    Job identifier:
    smjt3e5alzj2pwlw
  • Action:
    apply_model_cox_ChAdOx_death
    Status:
    Succeeded
    Job identifier:
    2bsdvemzprfn5puv
  • Action:
    apply_model_cox_both_death
    Status:
    Succeeded
    Job identifier:
    syw7own6bqstcc7r
  • Action:
    apply_model_cox_both_coviddeath
    Status:
    Failed
    Job identifier:
    fdkxewjwlrk2gvh3
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    apply_model_cox_ChAdOx_postest
    Status:
    Succeeded
    Job identifier:
    xi6g437uve7d4tys
  • Action:
    apply_model_cox_both_postest
    Status:
    Succeeded
    Job identifier:
    fbbcabzpko4fiavt
  • Action:
    apply_model_cox_both_covidadmitted
    Status:
    Succeeded
    Job identifier:
    gfimhe7w4wefnh32
  • Action:
    plot_model_cox_ChAdOx
    Status:
    Succeeded
    Job identifier:
    uufjeaelwegrqizw
  • Action:
    tables_model_cox_ChAdOx
    Status:
    Succeeded
    Job identifier:
    qdudor7qm2exacnf
  • Action:
    tables_model_cox_both
    Status:
    Failed
    Job identifier:
    bxgyccdreitehwvq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_model_cox_both
    Status:
    Failed
    Job identifier:
    r5hzwjqm652sgngf
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 18:37:01

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-ve-change-over-time--combine-jcvi-groups-in-model
Requested by
Elsie Horne
Branch
combine-jcvi-groups-in-model
Force run dependencies
No
Git commit hash
b248e9b
Requested actions
  • data_tte_process_ChAdOx_postest
  • apply_model_cox_ChAdOx_postest
  • data_tte_process_ChAdOx_covidadmitted
  • apply_model_cox_ChAdOx_covidadmitted
  • data_tte_process_ChAdOx_coviddeath
  • apply_model_cox_ChAdOx_coviddeath
  • data_tte_process_ChAdOx_death
  • apply_model_cox_ChAdOx_death
  • plot_model_cox_ChAdOx
  • tables_model_cox_ChAdOx
  • data_tte_process_both_postest
  • apply_model_cox_both_postest
  • data_tte_process_both_covidadmitted
  • apply_model_cox_both_covidadmitted
  • data_tte_process_both_coviddeath
  • apply_model_cox_both_coviddeath
  • data_tte_process_both_death
  • apply_model_cox_both_death
  • plot_model_cox_both
  • tables_model_cox_both

Code comparison

Compare the code used in this job request