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Job request: 5515

Organisation:
University of Bristol
Workspace:
covid-ve-change-over-time--manuscript
ID:
sl6ohldirdmakfna
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Elsie Horne requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    preflight_ChAdOx_3_covidadmitted
    Status:
    Succeeded
    Job identifier:
    5yaoyt4mrc32oogu
  • Action:
    preflight_both_4_covidadmitted
    Status:
    Failed
    Job identifier:
    cqidi4ul22cxvadw
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    preflight_ChAdOx_4_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    v7dtfdvejezuom6o
  • Action:
    preflight_both_4_noncoviddeath
    Status:
    Failed
    Job identifier:
    u3uiou446t2rg6wf
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    preflight_ChAdOx_3_anytest
    Status:
    Succeeded
    Job identifier:
    wdhqfzjrxtm4lrdm
  • Action:
    preflight_both_3_postest
    Status:
    Succeeded
    Job identifier:
    7y7vjdv2evqx2bsu
  • Action:
    preflight_ChAdOx_1_covidadmitted
    Status:
    Succeeded
    Job identifier:
    qy6n4shby7kkgq7y
  • Action:
    preflight_ChAdOx_1_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    jvh5wqwrcncn54vu
  • Action:
    preflight_both_4_postest
    Status:
    Succeeded
    Job identifier:
    fezc33uoj7yzmtqi
  • Action:
    preflight_both_1_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    bi3nxvc47fglufjn
  • Action:
    preflight_both_1_covidadmitted
    Status:
    Succeeded
    Job identifier:
    czt4rpynfriujrby
  • Action:
    preflight_ChAdOx_3_postest
    Status:
    Failed
    Job identifier:
    46shkkwtwyusud4y
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    preflight_ChAdOx_4_anytest
    Status:
    Succeeded
    Job identifier:
    ti66kdy55encuazh
  • Action:
    preflight_ChAdOx_4_coviddeath
    Status:
    Succeeded
    Job identifier:
    kefvkwickjxrfcyw
  • Action:
    preflight_ChAdOx_1_coviddeath
    Status:
    Succeeded
    Job identifier:
    kktip6hofsbvb4kg
  • Action:
    preflight_both_1_postest
    Status:
    Succeeded
    Job identifier:
    uz5yokuiv6ln5epc
  • Action:
    preflight_ChAdOx_3_coviddeath
    Status:
    Failed
    Job identifier:
    ls4sqrmjkr6ochyr
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    preflight_both_3_covidadmitted
    Status:
    Failed
    Job identifier:
    6td6yiilsvtyh42g
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    preflight_both_4_anytest
    Status:
    Succeeded
    Job identifier:
    zqcv45nh6m24wbbg
  • Action:
    preflight_ChAdOx_4_covidadmitted
    Status:
    Succeeded
    Job identifier:
    kajv4ezt4po64ozh
  • Action:
    preflight_both_4_coviddeath
    Status:
    Succeeded
    Job identifier:
    u6xezxdpamokv4gr
  • Action:
    preflight_ChAdOx_1_postest
    Status:
    Succeeded
    Job identifier:
    k7puyrittbqhvx4h
  • Action:
    preflight_ChAdOx_3_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    cg675wn6skvoc6zd
  • Action:
    preflight_ChAdOx_1_anytest
    Status:
    Succeeded
    Job identifier:
    otppn3hi2xtmeglc
  • Action:
    preflight_both_1_coviddeath
    Status:
    Succeeded
    Job identifier:
    cxclqbahrdlqubfb
  • Action:
    preflight_both_3_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    pnkhz5pzyuor7n7n
  • Action:
    preflight_ChAdOx_4_postest
    Status:
    Succeeded
    Job identifier:
    7pm5qast26pd4lwc
  • Action:
    preflight_both_3_coviddeath
    Status:
    Succeeded
    Job identifier:
    usdu7spv2uyzhx6a
  • Action:
    preflight_both_1_anytest
    Status:
    Succeeded
    Job identifier:
    6bx4silcjsjwepvc
  • Action:
    preflight_both_3_anytest
    Status:
    Succeeded
    Job identifier:
    6ykepyemqgeymbns
  • Action:
    apply_model_cox_ChAdOx_1_anytest
    Status:
    Succeeded
    Job identifier:
    vqvxenath2n5ri7y
  • Action:
    apply_model_cox_ChAdOx_1_covidadmitted
    Status:
    Succeeded
    Job identifier:
    5ul5uqmze7ybupsw
  • Action:
    apply_model_cox_ChAdOx_1_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    q3ri5t4uay5smhta
  • Action:
    apply_model_cox_ChAdOx_1_coviddeath
    Status:
    Succeeded
    Job identifier:
    c5fda43menfjp4vj
  • Action:
    apply_model_cox_ChAdOx_4_covidadmitted
    Status:
    Succeeded
    Job identifier:
    qwbmsq2jp6luut4n
  • Action:
    apply_model_cox_ChAdOx_3_covidadmitted
    Status:
    Succeeded
    Job identifier:
    wlzssmn6qtmrojbb
  • Action:
    apply_model_cox_both_1_anytest
    Status:
    Succeeded
    Job identifier:
    s4e6eg25dsvam2ao
  • Action:
    apply_model_cox_both_4_coviddeath
    Status:
    Succeeded
    Job identifier:
    pafbffdsmwnhtkgp
  • Action:
    apply_model_cox_ChAdOx_4_anytest
    Status:
    Succeeded
    Job identifier:
    neytfpd3gwwigmq4
  • Action:
    apply_model_cox_both_3_anytest
    Status:
    Succeeded
    Job identifier:
    mtxjukqiz454ktcr
  • Action:
    apply_model_cox_both_1_coviddeath
    Status:
    Succeeded
    Job identifier:
    65xfu3rvwoeqapc7
  • Action:
    apply_model_cox_both_3_postest
    Status:
    Succeeded
    Job identifier:
    2yadmtgvgwklvsoj
  • Action:
    apply_model_cox_ChAdOx_4_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    c7fo3rv655oqinst
  • Action:
    apply_model_cox_both_4_anytest
    Status:
    Succeeded
    Job identifier:
    kzyh4toxkkvqu4ei
  • Action:
    apply_model_cox_ChAdOx_4_postest
    Status:
    Succeeded
    Job identifier:
    m4bvet2x7honaap6
  • Action:
    apply_model_cox_both_1_postest
    Status:
    Succeeded
    Job identifier:
    tmuzq43hyaclxerv
  • Action:
    apply_model_cox_both_1_covidadmitted
    Status:
    Succeeded
    Job identifier:
    bj5q35qi3jq27idh
  • Action:
    apply_model_cox_ChAdOx_3_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    veyqtzwhb6pzzpfq
  • Action:
    apply_model_cox_ChAdOx_1_postest
    Status:
    Succeeded
    Job identifier:
    qvhg7rpxywoja5jz
  • Action:
    apply_model_cox_both_1_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    ewvimd4hawmzftez
  • Action:
    apply_model_cox_both_3_coviddeath
    Status:
    Succeeded
    Job identifier:
    rks4lvz6qytindsx
  • Action:
    apply_model_cox_both_3_noncoviddeath
    Status:
    Succeeded
    Job identifier:
    hguijoadozefmtxm
  • Action:
    apply_model_cox_both_4_postest
    Status:
    Succeeded
    Job identifier:
    r3mgextamf4omato
  • Action:
    apply_model_cox_ChAdOx_4_coviddeath
    Status:
    Succeeded
    Job identifier:
    jkpovbws35r2r6xb
  • Action:
    apply_model_cox_ChAdOx_3_anytest
    Status:
    Succeeded
    Job identifier:
    ouitdo3ddkysv3yp
  • Action:
    tables_model_cox_ChAdOx_1
    Status:
    Succeeded
    Job identifier:
    75giphmjtft633o6
  • Action:
    tables_model_cox_ChAdOx_4
    Status:
    Succeeded
    Job identifier:
    jazapmhx44whywuz
  • Action:
    tables_model_cox_both_1
    Status:
    Succeeded
    Job identifier:
    jprgrtls3p6g74jv
  • Action:
    plot_hr_anytest_BNT162b2vsChAdOx
    Status:
    Succeeded
    Job identifier:
    gbaudro2rypdhuul
  • Action:
    plot_hr_anytest_BNT162b2andChAdOx
    Status:
    Succeeded
    Job identifier:
    vjtc72ah3fn3imy4
  • Action:
    plot_hr_anytest_ChAdOx
    Status:
    Succeeded
    Job identifier:
    4bqdhy3mwicsyd6t
  • Action:
    tables_model_cox_both_4
    Status:
    Failed
    Job identifier:
    z5hmkd7y4egojgfy
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_coefs_both
    Status:
    Failed
    Job identifier:
    s2aedbata2dtreuz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_both_4_covidadmitted
    Status:
    Failed
    Job identifier:
    244j2kplvwi7ttoe
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_hr_ChAdOx
    Status:
    Failed
    Job identifier:
    samvdlcxyzq3g32x
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_hr_BNT162b2vsChAdOx
    Status:
    Failed
    Job identifier:
    6hxklszw37gjwrca
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_both_4_noncoviddeath
    Status:
    Failed
    Job identifier:
    lbt3n5unxypfr4vl
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_both_3_covidadmitted
    Status:
    Failed
    Job identifier:
    3mp2sycr4kywcmmz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_ChAdOx_3_coviddeath
    Status:
    Failed
    Job identifier:
    u4slx5qtzzzmanj4
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_hr_BNT162b2andChAdOx
    Status:
    Failed
    Job identifier:
    ep5cflgkhimjxy2n
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    apply_model_cox_ChAdOx_3_postest
    Status:
    Failed
    Job identifier:
    rqaidoundisjgj7d
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    tables_model_cox_ChAdOx_3
    Status:
    Failed
    Job identifier:
    yl5quvue4jhhpxb6
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    tables_model_cox_both_3
    Status:
    Failed
    Job identifier:
    tv23nomedmcvlczj
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_coefs_ChAdOx
    Status:
    Failed
    Job identifier:
    jtiamie4irfdph57
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 37:25:19

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-ve-change-over-time--manuscript
Requested by
Elsie Horne
Branch
main
Force run dependencies
No
Git commit hash
7b2fea3
Requested actions
  • preflight_ChAdOx_1_anytest
  • apply_model_cox_ChAdOx_1_anytest
  • preflight_ChAdOx_1_postest
  • apply_model_cox_ChAdOx_1_postest
  • preflight_ChAdOx_1_covidadmitted
  • apply_model_cox_ChAdOx_1_covidadmitted
  • preflight_ChAdOx_1_coviddeath
  • apply_model_cox_ChAdOx_1_coviddeath
  • preflight_ChAdOx_1_noncoviddeath
  • apply_model_cox_ChAdOx_1_noncoviddeath
  • tables_model_cox_ChAdOx_1
  • preflight_ChAdOx_3_anytest
  • apply_model_cox_ChAdOx_3_anytest
  • preflight_ChAdOx_3_postest
  • apply_model_cox_ChAdOx_3_postest
  • preflight_ChAdOx_3_covidadmitted
  • apply_model_cox_ChAdOx_3_covidadmitted
  • preflight_ChAdOx_3_coviddeath
  • apply_model_cox_ChAdOx_3_coviddeath
  • preflight_ChAdOx_3_noncoviddeath
  • apply_model_cox_ChAdOx_3_noncoviddeath
  • tables_model_cox_ChAdOx_3
  • preflight_ChAdOx_4_anytest
  • apply_model_cox_ChAdOx_4_anytest
  • preflight_ChAdOx_4_postest
  • apply_model_cox_ChAdOx_4_postest
  • preflight_ChAdOx_4_covidadmitted
  • apply_model_cox_ChAdOx_4_covidadmitted
  • preflight_ChAdOx_4_coviddeath
  • apply_model_cox_ChAdOx_4_coviddeath
  • preflight_ChAdOx_4_noncoviddeath
  • apply_model_cox_ChAdOx_4_noncoviddeath
  • tables_model_cox_ChAdOx_4
  • preflight_both_1_anytest
  • apply_model_cox_both_1_anytest
  • preflight_both_1_postest
  • apply_model_cox_both_1_postest
  • preflight_both_1_covidadmitted
  • apply_model_cox_both_1_covidadmitted
  • preflight_both_1_coviddeath
  • apply_model_cox_both_1_coviddeath
  • preflight_both_1_noncoviddeath
  • apply_model_cox_both_1_noncoviddeath
  • tables_model_cox_both_1
  • preflight_both_3_anytest
  • apply_model_cox_both_3_anytest
  • preflight_both_3_postest
  • apply_model_cox_both_3_postest
  • preflight_both_3_covidadmitted
  • apply_model_cox_both_3_covidadmitted
  • preflight_both_3_coviddeath
  • apply_model_cox_both_3_coviddeath
  • preflight_both_3_noncoviddeath
  • apply_model_cox_both_3_noncoviddeath
  • tables_model_cox_both_3
  • preflight_both_4_anytest
  • apply_model_cox_both_4_anytest
  • preflight_both_4_postest
  • apply_model_cox_both_4_postest
  • preflight_both_4_covidadmitted
  • apply_model_cox_both_4_covidadmitted
  • preflight_both_4_coviddeath
  • apply_model_cox_both_4_coviddeath
  • preflight_both_4_noncoviddeath
  • apply_model_cox_both_4_noncoviddeath
  • tables_model_cox_both_4
  • plot_hr_anytest_ChAdOx
  • plot_hr_ChAdOx
  • plot_hr_anytest_BNT162b2andChAdOx
  • plot_hr_BNT162b2andChAdOx
  • plot_hr_anytest_BNT162b2vsChAdOx
  • plot_hr_BNT162b2vsChAdOx
  • plot_coefs_ChAdOx
  • plot_coefs_both

Code comparison

Compare the code used in this job request