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Job request: 4793

Organisation:
University of Bristol
Workspace:
covid-ve-change-over-time--process-data-for-models
ID:
sgewv3pixqgm4qjk
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Elsie Horne requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    data_tte_process_02_covidadmitted
    Status:
    Succeeded
    Job identifier:
    z234xornsg5my6we
  • Action:
    data_tte_process_02_coviddeath
    Status:
    Succeeded
    Job identifier:
    a5zd2duwdtdkaja5
  • Action:
    data_comparisons_process_05
    Status:
    Succeeded
    Job identifier:
    s4bmfnyqaerv32kp
  • Action:
    data_tte_process_02_postest
    Status:
    Succeeded
    Job identifier:
    od5gpvkht6hx23u5
  • Action:
    data_tte_process_02_death
    Status:
    Succeeded
    Job identifier:
    i7246aebgse5cdgx
  • Action:
    apply_model_cox_02_death
    Status:
    Succeeded
    Job identifier:
    a4nv4t7lj2zshp5t
  • Action:
    apply_model_cox_02_covidadmitted
    Status:
    Succeeded
    Job identifier:
    wu2luze7hncsfajk
  • Action:
    apply_model_cox_02_coviddeath
    Status:
    Failed
    Job identifier:
    6e2mdw7zee2jvymf
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    apply_model_cox_02_postest
    Status:
    Succeeded
    Job identifier:
    gwtc4lkufr75oimx
  • Action:
    data_outcomes_process_05
    Status:
    Succeeded
    Job identifier:
    fx3xrflr4mjrzpat
  • Action:
    data_tte_process_05_postest
    Status:
    Succeeded
    Job identifier:
    jctxa67cgu2ly3lc
  • Action:
    check_combine_outcomes_05
    Status:
    Succeeded
    Job identifier:
    2cfhmjyqeici45w4
  • Action:
    data_tte_process_05_death
    Status:
    Succeeded
    Job identifier:
    3msbeh5lxm7s2vjc
  • Action:
    data_tte_process_05_coviddeath
    Status:
    Succeeded
    Job identifier:
    bx647bfilcys2xza
  • Action:
    data_tte_process_05_covidadmitted
    Status:
    Succeeded
    Job identifier:
    fewnvk7snkmxskv7
  • Action:
    apply_model_cox_05_coviddeath
    Status:
    Succeeded
    Job identifier:
    v5dcu4437fyjnguq
  • Action:
    apply_model_cox_05_covidadmitted
    Status:
    Succeeded
    Job identifier:
    xvyn3h3axcjtmr2c
  • Action:
    apply_model_cox_05_postest
    Status:
    Succeeded
    Job identifier:
    6ne2qyeselwvkzoq
  • Action:
    apply_model_cox_05_death
    Status:
    Succeeded
    Job identifier:
    kndr3yl4x75xsx3w
  • Action:
    tables_model_cox_05
    Status:
    Succeeded
    Job identifier:
    x6orth53j36eqfij
  • Action:
    plot_model_cox_05
    Status:
    Succeeded
    Job identifier:
    ut4f7sftznvdkkkc
  • Action:
    tables_model_cox_02
    Status:
    Failed
    Job identifier:
    esol7f5lhjoxzqdh
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    plot_model_cox_02
    Status:
    Failed
    Job identifier:
    zzrhsductrzjcqqx
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 02:12:10

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-ve-change-over-time--process-data-for-models
Requested by
Elsie Horne
Branch
process-data-for-models
Force run dependencies
No
Git commit hash
1f47a45
Requested actions
  • data_tte_process_02_postest
  • apply_model_cox_02_postest
  • data_tte_process_02_covidadmitted
  • apply_model_cox_02_covidadmitted
  • data_tte_process_02_coviddeath
  • apply_model_cox_02_coviddeath
  • data_tte_process_02_death
  • apply_model_cox_02_death
  • plot_model_cox_02
  • tables_model_cox_02
  • data_comparisons_process_05
  • data_outcomes_process_05
  • check_combine_outcomes_05
  • data_tte_process_05_postest
  • apply_model_cox_05_postest
  • data_tte_process_05_covidadmitted
  • apply_model_cox_05_covidadmitted
  • data_tte_process_05_coviddeath
  • apply_model_cox_05_coviddeath
  • data_tte_process_05_death
  • apply_model_cox_05_death
  • plot_model_cox_05
  • tables_model_cox_05

Code comparison

Compare the code used in this job request