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Job request: 15847

Organisation:
Bennett Institute
Workspace:
long-covid-sick-notes
ID:
cvnkia3ycxditnib
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Andrea Schaffer requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    covid_hosp_2021_rates
    Status:
    Status: Succeeded
    Job identifier:
    sdr46kwyqf74lid3
  • Action:
    covid_hosp_2020_rates
    Status:
    Status: Succeeded
    Job identifier:
    l64egn6dqlxasldj
  • Action:
    describe_duration_diagnoses
    Status:
    Status: Failed
    Job identifier:
    6qmasbvec6keawh4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    visualise_diagnoses
    Status:
    Status: Failed
    Job identifier:
    mwaqj27pejsgl7zs
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    table1
    Status:
    Status: Failed
    Job identifier:
    5vkhygiaoaogfawa
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    append_cohorts
    Status:
    Status: Failed
    Job identifier:
    sam6det3d3xgjwe3
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_split_2021_pneumo
    Status:
    Status: Failed
    Job identifier:
    6tplrdb4k5zrxmei
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_split_2020_pneumo
    Status:
    Status: Failed
    Job identifier:
    iubdzylqgcaklaut
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models
    Status:
    Status: Failed
    Job identifier:
    mjwwwos5vuz76f5i
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:25:10

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
long-covid-sick-notes
Requested by
Andrea Schaffer
Branch
master
Force run dependencies
No
Git commit hash
6659b1b
Requested actions
  • covid_hosp_2020_rates
  • covid_hosp_2021_rates
  • append_cohorts
  • cox_models
  • cox_models_split_2020_pneumo
  • cox_models_split_2021_pneumo
  • describe_duration_diagnoses
  • table1
  • visualise_diagnoses

Code comparison

Compare the code used in this job request