Skip to content

Job request: 17893

Organisation:
Bennett Institute
Workspace:
long-covid-sick-notes
ID:
kkdrv3oagbvyzzun
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Andrea Schaffer requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_study_population_general_match_vars_2022
    Status:
    Succeeded
    Job identifier:
    oeev46zmpy4xaodu
  • Action:
    generate_study_population_general_match_vars_2019
    Status:
    Succeeded
    Job identifier:
    eobefp25dookyuds
  • Action:
    generate_study_population_covid_2022
    Status:
    Succeeded
    Job identifier:
    foefedy5prgd3ddq
  • Action:
    generate_study_population_pneumonia_2019
    Status:
    Succeeded
    Job identifier:
    k3ln7mgowzxl7cxu
  • Action:
    generate_study_population_covid_2021
    Status:
    Succeeded
    Job identifier:
    ec3q7oelyji6b7in
  • Action:
    generate_study_population_general_match_vars_2021
    Status:
    Succeeded
    Job identifier:
    ffiiyl22tv4iv6da
  • Action:
    generate_study_population_covid_2020
    Status:
    Succeeded
    Job identifier:
    r4qmisxesk7fxmub
  • Action:
    generate_study_population_general_match_vars_2020
    Status:
    Succeeded
    Job identifier:
    lo4fdq3n6qeyk273
  • Action:
    reconcile_sick_note_spells_pneumonia_2019
    Status:
    Succeeded
    Job identifier:
    2nuyysb7spryuh7e
  • Action:
    pneumonia_2019_rates_cohort
    Status:
    Succeeded
    Job identifier:
    wcvvdnsnif2lbr7o
  • Action:
    pneumonia_2019_rates
    Status:
    Succeeded
    Job identifier:
    z6g7emgzgdrnsvdk
  • Action:
    matching_2022
    Status:
    Succeeded
    Job identifier:
    wokd4z4cxbfcefdc
  • Action:
    reconcile_sick_note_spells_covid_2022
    Status:
    Succeeded
    Job identifier:
    7ooot73wdoq56hs6
  • Action:
    covid_2022_rates_cohort
    Status:
    Succeeded
    Job identifier:
    gp66zlwx2sbiuooa
  • Action:
    covid_2022_rates
    Status:
    Succeeded
    Job identifier:
    bdit4tjozg5oa3x6
  • Action:
    covid_hosp_2022_rates
    Status:
    Succeeded
    Job identifier:
    ytjxjxqja7sar3vz
  • Action:
    generate_study_population_matched_2022
    Status:
    Succeeded
    Job identifier:
    ncfbnhhybhaypkcr
  • Action:
    reconcile_sick_note_spells_general_2022
    Status:
    Succeeded
    Job identifier:
    2fjvqejqcun5nigp
  • Action:
    general_2022_rates_cohort
    Status:
    Succeeded
    Job identifier:
    xvap2lj3te7iioq4
  • Action:
    general_2022_rates
    Status:
    Succeeded
    Job identifier:
    fsudetu4gakgodw5
  • Action:
    reconcile_sick_note_spells_covid_2020
    Status:
    Succeeded
    Job identifier:
    vbkyvbkvpcq7rhdd
  • Action:
    matching_2019
    Status:
    Succeeded
    Job identifier:
    x6tfd5eg7djqdecq
  • Action:
    matching_2020
    Status:
    Succeeded
    Job identifier:
    g3suy4rmhffcbbcz
  • Action:
    covid_2020_rates_cohort
    Status:
    Succeeded
    Job identifier:
    iothojpy7lsqmc2b
  • Action:
    covid_2020_rates
    Status:
    Succeeded
    Job identifier:
    2bwcdfoxzggg6flt
  • Action:
    covid_hosp_2020_rates
    Status:
    Succeeded
    Job identifier:
    qpl6z64ouhigms2f
  • Action:
    generate_study_population_matched_2019
    Status:
    Succeeded
    Job identifier:
    yevbs3ulfpso64yb
  • Action:
    generate_study_population_matched_2020
    Status:
    Succeeded
    Job identifier:
    ib7ebllbizhuzanx
  • Action:
    reconcile_sick_note_spells_general_2019
    Status:
    Succeeded
    Job identifier:
    o2k3txuyfy7udbgq
  • Action:
    general_2019_rates_cohort
    Status:
    Succeeded
    Job identifier:
    4l4rle7ec7so4i2e
  • Action:
    general_2019_rates
    Status:
    Succeeded
    Job identifier:
    4mr4rwyrq6g7azui
  • Action:
    reconcile_sick_note_spells_general_2020
    Status:
    Succeeded
    Job identifier:
    cdxrox432hj6rbns
  • Action:
    general_2020_rates_cohort
    Status:
    Succeeded
    Job identifier:
    7nouxtxondpvqxiv
  • Action:
    general_2020_rates
    Status:
    Succeeded
    Job identifier:
    mlm6f2oyzsz7tvg4
  • Action:
    reconcile_sick_note_spells_covid_2021
    Status:
    Succeeded
    Job identifier:
    h4q5ttyycdwxph25
  • Action:
    matching_2021
    Status:
    Succeeded
    Job identifier:
    2i4xw5t6pqichv7s
  • Action:
    covid_2021_rates_cohort
    Status:
    Succeeded
    Job identifier:
    6txq6kxx6tfy4shd
  • Action:
    covid_hosp_2021_rates
    Status:
    Succeeded
    Job identifier:
    lbyhndcnkbxu5q44
  • Action:
    covid_2021_rates
    Status:
    Succeeded
    Job identifier:
    ktiayhvfeaoam4qt
  • Action:
    generate_study_population_matched_2021
    Status:
    Succeeded
    Job identifier:
    sw4koxe7nymt3urc
  • Action:
    reconcile_sick_note_spells_general_2021
    Status:
    Succeeded
    Job identifier:
    imz4el6zgztdqydc
  • Action:
    general_2021_rates_cohort
    Status:
    Succeeded
    Job identifier:
    kjsfabg3d2xnkbd4
  • Action:
    append_cohorts
    Status:
    Succeeded
    Job identifier:
    2ebmd2o6jmcui4k3
  • Action:
    general_2021_rates
    Status:
    Succeeded
    Job identifier:
    45cx65a5mygeoybm
  • Action:
    cox_models_split_2022_pneumo_region
    Status:
    Failed
    Job identifier:
    tzkxoarayu3yjzud
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2021_pneumo_sex
    Status:
    Succeeded
    Job identifier:
    fk3i2zfo7rhqtyeg
  • Action:
    cox_models_split_2020_pneumo
    Status:
    Succeeded
    Job identifier:
    3vd4utslvaybkbeu
  • Action:
    cox_models_split_gen_2020_age
    Status:
    Succeeded
    Job identifier:
    kshiecm26evpaobp
  • Action:
    table1
    Status:
    Succeeded
    Job identifier:
    rxbxoapkqmyqpwtn
  • Action:
    cox_models_split_2021_gen_2019_sex
    Status:
    Succeeded
    Job identifier:
    eo5ri275b5wpwew3
  • Action:
    cox_models_split_2021_gen_2019_ethnicity
    Status:
    Succeeded
    Job identifier:
    zreo7hvcrvgxyrs2
  • Action:
    cox_models_split_2022_pneumo_ethnicity
    Status:
    Failed
    Job identifier:
    irq3wajnybr75655
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_age
    Status:
    Succeeded
    Job identifier:
    jrze5hkmmf4djyqw
  • Action:
    cox_models_split_gen_2022_age
    Status:
    Failed
    Job identifier:
    mpmq5bcbter5nsa7
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_gen_2020_region
    Status:
    Succeeded
    Job identifier:
    z3gwmpcy7we2nkwh
  • Action:
    cox_models_split_2020_gen_2019_imd
    Status:
    Succeeded
    Job identifier:
    utfcphwxv4xdn3b6
  • Action:
    cox_models_split_2020_pneumo_imd
    Status:
    Succeeded
    Job identifier:
    balegzeibjfxqb6r
  • Action:
    cox_models_split_2021_gen_2019_age
    Status:
    Succeeded
    Job identifier:
    jqebh3f4ne6wvdxp
  • Action:
    cox_models_split_2022_gen_2019_age
    Status:
    Failed
    Job identifier:
    qtpidxbg4sqyinxs
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models
    Status:
    Succeeded
    Job identifier:
    whtwgecxlhhxrzzz
  • Action:
    cox_models_imd
    Status:
    Succeeded
    Job identifier:
    4hw3lqoaglyncjie
  • Action:
    cox_models_split_2022_pneumo_age
    Status:
    Failed
    Job identifier:
    goiavktnvibatp7b
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2020_gen_2019_age
    Status:
    Succeeded
    Job identifier:
    crokpvkxleotnhrn
  • Action:
    cox_models_split_2022_gen_2019_imd
    Status:
    Failed
    Job identifier:
    yueztsglajckzeuu
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2022_gen_2019_region
    Status:
    Failed
    Job identifier:
    5pka7tvy4ry7imld
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_gen_2021_age
    Status:
    Succeeded
    Job identifier:
    pfxnb4kabpsqyk32
  • Action:
    cox_models_split_gen_2020_sex
    Status:
    Succeeded
    Job identifier:
    flznk7nzrrvy7aes
  • Action:
    cox_models_split_2021_gen_2019_region
    Status:
    Succeeded
    Job identifier:
    kzim5ldpv3y3hj2n
  • Action:
    cox_models_split_2020_gen_2019_region
    Status:
    Succeeded
    Job identifier:
    gnihbiwvpynshans
  • Action:
    cox_models_split_2021_gen_2019_imd
    Status:
    Succeeded
    Job identifier:
    oopcebght6mtl2ew
  • Action:
    cox_models_split_2020_pneumo_region
    Status:
    Succeeded
    Job identifier:
    kx2lnty55dvatek3
  • Action:
    cox_models_region
    Status:
    Succeeded
    Job identifier:
    dlhbga6htieikxj4
  • Action:
    cox_models_split_gen_2020_ethnicity
    Status:
    Succeeded
    Job identifier:
    bct6nqc5xbowfxav
  • Action:
    cox_models_split_2021_gen_2019
    Status:
    Succeeded
    Job identifier:
    pbyhzlds52owfchk
  • Action:
    cox_models_split_2022_gen_2019
    Status:
    Failed
    Job identifier:
    d2b3pj5sd4pawap4
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_gen_2020_imd
    Status:
    Succeeded
    Job identifier:
    gsfkwvm45exaxhrw
  • Action:
    cox_models_split_gen_2021
    Status:
    Succeeded
    Job identifier:
    yubssqkw5ohni673
  • Action:
    cox_models_split_2020_gen_2019_ethnicity
    Status:
    Succeeded
    Job identifier:
    ky7tpgy2buweskps
  • Action:
    cox_models_split_2021_pneumo_region
    Status:
    Failed
    Job identifier:
    chedrl7rpeara34n
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_gen_2021_sex
    Status:
    Succeeded
    Job identifier:
    qizjp5qhubglqike
  • Action:
    cox_models_split_gen_2021_ethnicity
    Status:
    Succeeded
    Job identifier:
    lh4xotohj422f3k6
  • Action:
    cox_models_split_2022_pneumo_imd
    Status:
    Failed
    Job identifier:
    eao4o6x3zsyjkbkc
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2022_pneumo
    Status:
    Failed
    Job identifier:
    z3oi3dd6yev7ogxd
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_ethnicity
    Status:
    Succeeded
    Job identifier:
    hj2ffmpmwfv4e7b5
  • Action:
    cox_models_split_2020_gen_2019
    Status:
    Succeeded
    Job identifier:
    x75nq5cnewrbra6g
  • Action:
    cox_models_split_gen_2022_sex
    Status:
    Failed
    Job identifier:
    pxeouddagy5nso7j
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2020_gen_2019_sex
    Status:
    Succeeded
    Job identifier:
    tk5yo3t4d5mxycyg
  • Action:
    cox_models_split_2021_pneumo_age
    Status:
    Succeeded
    Job identifier:
    ifzj4lcm5ljok4pj
  • Action:
    cox_models_split_gen_2022
    Status:
    Failed
    Job identifier:
    bnwtfrrlkteeveqh
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2020_pneumo_ethnicity
    Status:
    Succeeded
    Job identifier:
    f3wwyyudcgsqar3m
  • Action:
    cox_models_split_2022_gen_2019_ethnicity
    Status:
    Failed
    Job identifier:
    zbdgpuwotvc7viqb
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_sex
    Status:
    Succeeded
    Job identifier:
    ug2c4fs27f3pksas
  • Action:
    cox_models_split_gen_2021_region
    Status:
    Succeeded
    Job identifier:
    fuhkcblc6vh4mlv4
  • Action:
    cox_models_split_2022_gen_2019_sex
    Status:
    Failed
    Job identifier:
    5vasgijsg6pexco3
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2021_pneumo_ethnicity
    Status:
    Succeeded
    Job identifier:
    v5ehvhywxfik6qku
  • Action:
    cox_models_split_2021_pneumo_imd
    Status:
    Succeeded
    Job identifier:
    k75jjwi2mjngetuc
  • Action:
    cox_models_split_2022_pneumo_sex
    Status:
    Failed
    Job identifier:
    leb7ciwbee4mm4fc
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_gen_2022_ethnicity
    Status:
    Failed
    Job identifier:
    qc3s57eqchcwno76
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_gen_2020
    Status:
    Succeeded
    Job identifier:
    vziqzzvsomxwzfx6
  • Action:
    cox_models_split_2020_pneumo_sex
    Status:
    Succeeded
    Job identifier:
    d5fmoizbpceenqv2
  • Action:
    visualise_diagnoses
    Status:
    Failed
    Job identifier:
    ka5i65zv6dgcedha
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_2021_pneumo
    Status:
    Succeeded
    Job identifier:
    ixa7sfpgxzmbub6x
  • Action:
    cox_models_split_gen_2022_region
    Status:
    Failed
    Job identifier:
    u3qjgwiiflns6fpv
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_split_gen_2021_imd
    Status:
    Succeeded
    Job identifier:
    2vjm32m3wm3bcfm2
  • Action:
    cox_models_split_2020_pneumo_age
    Status:
    Succeeded
    Job identifier:
    vxkt7vyfm5mxmdl7
  • Action:
    cox_models_split_gen_2022_imd
    Status:
    Failed
    Job identifier:
    wflqktedsdwztbir
    Error:
    nonzero_exit: Job exited with an error

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 645:34:40

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
long-covid-sick-notes
Requested by
Andrea Schaffer
Branch
master
Force run dependencies
Yes
Git commit hash
1aef59a
Requested actions
  • run_all

Code comparison

Compare the code used in this job request