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Job request: 8980

Organisation:
University of Bristol
Workspace:
long-covid-risk-factors
ID:
xxvaolr7ntkwvelv
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Yinghui Wei requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    stage0_data_cleaning_all
    Status:
    Succeeded
    Job identifier:
    46ymltfwsj3got2k
  • Action:
    stage1_define_eligible_population_all
    Status:
    Failed
    Job identifier:
    sahi6d45tzpaetn5
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    development_cox_model_all_vax_td
    Status:
    Failed
    Job identifier:
    4sqofhfscyfeykue
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    development_cox_model_vax_c
    Status:
    Failed
    Job identifier:
    ah7miwd2c2ripzzq
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    table_2_all
    Status:
    Failed
    Job identifier:
    27r3hhp2g6npc5je
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    table_3_all
    Status:
    Failed
    Job identifier:
    w2vom2ni6kriu5tg
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    evaluation_cox_model_all_vax_td
    Status:
    Failed
    Job identifier:
    wky2b4q577jpjh6g
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    evaluation_cox_model_vax_c
    Status:
    Failed
    Job identifier:
    rt7hcn6km4wy5wdc
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    validation_cox_model_all
    Status:
    Failed
    Job identifier:
    bk5zbhmjob35koyq
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    validation_cox_model_vax_c
    Status:
    Failed
    Job identifier:
    frb3g6m34xgm3yly
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    figure_1_all
    Status:
    Failed
    Job identifier:
    l6peszlr2uoratue
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    figure_2_all
    Status:
    Failed
    Job identifier:
    iylu4w2aslnswwir
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    figure_cum_prob_km_all
    Status:
    Failed
    Job identifier:
    uuzgvivg43hc22w6
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    suppl_table_1_all
    Status:
    Failed
    Job identifier:
    6liun2e4z5rtkxxc
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    suppl_figure_1_all
    Status:
    Failed
    Job identifier:
    5qwqxlfdokkyibak
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    evaluation_cox_model_all
    Status:
    Failed
    Job identifier:
    tpvl3ujakn2qjxl7
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    validation_cox_model_all_vax_td
    Status:
    Failed
    Job identifier:
    fx5h5ljn2k3pej6l
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    table_1_all
    Status:
    Failed
    Job identifier:
    mkeu3hqkl76ecsqg
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    summarise_survival_data_all
    Status:
    Failed
    Job identifier:
    txmsal5sbk2duxpe
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    development_cox_model_all
    Status:
    Failed
    Job identifier:
    yqe5twmjyzmuz4k6
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Job statistics

Status Count Percentage
Pending 0 0%
Running 0 0%
Succeeded 1 5%
Failed 19 95%

20 / 20 (100%) complete

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:25:14

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
long-covid-risk-factors
Requested by
Yinghui Wei
Branch
main
Force run dependencies
No
Git commit hash
e79e647
Requested actions
  • stage0_data_cleaning_all
  • stage1_define_eligible_population_all
  • table_1_all
  • table_2_all
  • table_3_all
  • figure_1_all
  • figure_2_all
  • figure_cum_prob_km_all
  • suppl_table_1_all
  • suppl_figure_1_all
  • summarise_survival_data_all
  • development_cox_model_all
  • development_cox_model_vax_c
  • development_cox_model_all_vax_td
  • evaluation_cox_model_all
  • evaluation_cox_model_vax_c
  • evaluation_cox_model_all_vax_td
  • validation_cox_model_all
  • validation_cox_model_vax_c
  • validation_cox_model_all_vax_td

Code comparison

Compare the code used in this job request