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Job request: 13696

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
cabuxzqmy6gdxzww

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    match_20174_stp8
    Status:
    Status: Failed
    Job identifier:
    svn6wqp5kcwofdpk
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp27
    Status:
    Status: Failed
    Job identifier:
    k3rkjh5xz3e34odd
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp13
    Status:
    Status: Failed
    Job identifier:
    zqqbommkgbydb3hi
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp37
    Status:
    Status: Failed
    Job identifier:
    rszmgxwfqhzcibuq
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp42
    Status:
    Status: Failed
    Job identifier:
    wimceuh32iknphk2
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp49
    Status:
    Status: Failed
    Job identifier:
    xvg73zfxdk3sieht
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp24
    Status:
    Status: Failed
    Job identifier:
    kezuvte63hncrdk7
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp17
    Status:
    Status: Failed
    Job identifier:
    kweohx6wt5vosf7z
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp9
    Status:
    Status: Failed
    Job identifier:
    5nffhbc2awikos3x
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp23
    Status:
    Status: Failed
    Job identifier:
    mr2rfytyhysbougy
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp36
    Status:
    Status: Failed
    Job identifier:
    c6eydxkevuzbitcw
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp21
    Status:
    Status: Failed
    Job identifier:
    nuoslr2bk7aharpc
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp15
    Status:
    Status: Failed
    Job identifier:
    e3mkudm6ugydm6x3
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp43
    Status:
    Status: Failed
    Job identifier:
    u27eew2423qt5t4j
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp6
    Status:
    Status: Failed
    Job identifier:
    53prqljeqijjniiz
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp40
    Status:
    Status: Failed
    Job identifier:
    dajdywxg5zjsyump
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp22
    Status:
    Status: Failed
    Job identifier:
    cuxsr23xitegh6jq
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp41
    Status:
    Status: Failed
    Job identifier:
    wdrj7rqpjusr7hxc
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp35
    Status:
    Status: Failed
    Job identifier:
    gdr3pcymessyrack
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp16
    Status:
    Status: Failed
    Job identifier:
    ivwubhhkrbjovwnz
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp14
    Status:
    Status: Failed
    Job identifier:
    fuqhhvnejpa37fxq
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp33
    Status:
    Status: Failed
    Job identifier:
    ysqdzudfm5uhjiws
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp26
    Status:
    Status: Failed
    Job identifier:
    vqorvku5pysc5dxg
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp12
    Status:
    Status: Failed
    Job identifier:
    uppys6ojfk6kd6w7
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp44
    Status:
    Status: Failed
    Job identifier:
    xnigfjfba5ltmy6z
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp7
    Status:
    Status: Failed
    Job identifier:
    ieov45jfztclnrpe
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp5
    Status:
    Status: Failed
    Job identifier:
    truza4jd6l2kjz4w
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp25
    Status:
    Status: Failed
    Job identifier:
    rklnsjn4kc7xnpzc
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp29
    Status:
    Status: Failed
    Job identifier:
    rmoxtqydigsy6f2u
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp20
    Status:
    Status: Failed
    Job identifier:
    etwtbnapckt3fbsu
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp10
    Status:
    Status: Failed
    Job identifier:
    piezsh7xlm3ezmwz
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    extract_covid_20174_additional
    Status:
    Status: Failed
    Job identifier:
    5ltg7f7ippdjkm6y
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    cox_egfr_half_20174
    Status:
    Status: Failed
    Job identifier:
    mmla5hn6skpolxgy
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    cox_esrd_20174
    Status:
    Status: Failed
    Job identifier:
    xawn46djsq5kgmbm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descriptive_20174
    Status:
    Status: Failed
    Job identifier:
    zzzicjp652kkv7u3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_matches_20174
    Status:
    Status: Failed
    Job identifier:
    4vg27itgtpm7jpcz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_covid_20174
    Status:
    Status: Failed
    Job identifier:
    fygx6gg3hl7iy6rr
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 03:42:15

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
c70f3af
Requested actions
  • descriptive_20174
  • cox_esrd_20174
  • cox_egfr_half_20174

Code comparison

Compare the code used in this Job Request