Skip to content

Job request: 13723

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
6lkars7oflp7h7gy

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    split_stps_2017
    Status:
    Status: Succeeded
    Job identifier:
    tdabkikr4ow7csxf
  • Action:
    match_20174_stp15
    Status:
    Status: Failed
    Job identifier:
    bg7cj4zn4q7nnlvl
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp41
    Status:
    Status: Failed
    Job identifier:
    l2nzuhmxidxvhar4
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp27
    Status:
    Status: Failed
    Job identifier:
    iq62c2hmvlyay3t6
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp44
    Status:
    Status: Failed
    Job identifier:
    bzuzmoozoo7w4qq3
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp9
    Status:
    Status: Failed
    Job identifier:
    f5xizm6mxhkzfl2w
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp14
    Status:
    Status: Failed
    Job identifier:
    ynf4wa5m4hwkneaj
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp42
    Status:
    Status: Failed
    Job identifier:
    3biihlgno72bsjr2
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp17
    Status:
    Status: Failed
    Job identifier:
    s26refwkxblde4cr
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp8
    Status:
    Status: Failed
    Job identifier:
    ntiltkktzisfwwin
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp40
    Status:
    Status: Failed
    Job identifier:
    rt3ueeepobzwngpy
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp16
    Status:
    Status: Failed
    Job identifier:
    i74edribqa7kxson
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp43
    Status:
    Status: Failed
    Job identifier:
    srsuartiomf3dnfu
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp25
    Status:
    Status: Failed
    Job identifier:
    svzxufwhi3jdeqcv
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp22
    Status:
    Status: Failed
    Job identifier:
    7zvwfhyo4z6kals6
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp36
    Status:
    Status: Failed
    Job identifier:
    wstoancdjftbtpll
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp29
    Status:
    Status: Failed
    Job identifier:
    q7yrmailw6qfh76s
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp33
    Status:
    Status: Failed
    Job identifier:
    ah33gbnpkncfyido
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp21
    Status:
    Status: Failed
    Job identifier:
    aa7jmc2xp7lihzpi
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp10
    Status:
    Status: Failed
    Job identifier:
    x2zhdymzbetwxrqo
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp6
    Status:
    Status: Failed
    Job identifier:
    7h3l2nyqtih55y6x
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp49
    Status:
    Status: Failed
    Job identifier:
    phiee3ux4qrjmvkw
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp35
    Status:
    Status: Failed
    Job identifier:
    z6hpi4z6wx3w5xvz
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp24
    Status:
    Status: Failed
    Job identifier:
    eenhzud4iwbiya6b
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp37
    Status:
    Status: Failed
    Job identifier:
    zjdnsafqcuq3feum
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp12
    Status:
    Status: Failed
    Job identifier:
    j5wavjfsznfpezp5
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp20
    Status:
    Status: Failed
    Job identifier:
    calhrqvn4mlfzkbv
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp5
    Status:
    Status: Failed
    Job identifier:
    43j223em23v7rkhf
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp13
    Status:
    Status: Failed
    Job identifier:
    p3gchk2yisn3lfkc
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp7
    Status:
    Status: Failed
    Job identifier:
    htmh26fpv2gfngrp
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp26
    Status:
    Status: Failed
    Job identifier:
    eynl3b2rghnohdp4
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_20174_stp23
    Status:
    Status: Failed
    Job identifier:
    tw7ltabqj34jtusj
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    cox_egfr_half_20174
    Status:
    Status: Failed
    Job identifier:
    ixfjyst5wajtxpv3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    analysis_20174
    Status:
    Status: Failed
    Job identifier:
    l6panqm4rql22vpk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_covid_20174
    Status:
    Status: Failed
    Job identifier:
    oc6a6zftvropz3rv
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    extract_covid_20174_additional
    Status:
    Status: Failed
    Job identifier:
    qbg2nccmaknt3cxe
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    cox_esrd_20174
    Status:
    Status: Failed
    Job identifier:
    ktwfxagmujpf2r2z
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    extract_20174_additional
    Status:
    Status: Failed
    Job identifier:
    2kefanhycvrd4vt7
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    descriptive_20174
    Status:
    Status: Failed
    Job identifier:
    2apx7g4hbda74vly
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_matches_20174
    Status:
    Status: Failed
    Job identifier:
    dktja3wobcncvdqd
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 04:40:40

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
458d8d0
Requested actions
  • split_stps_2017
  • match_20174_stp5
  • match_20174_stp6
  • match_20174_stp7
  • match_20174_stp8
  • match_20174_stp9
  • match_20174_stp10
  • match_20174_stp12
  • match_20174_stp13
  • match_20174_stp14
  • match_20174_stp15
  • match_20174_stp16
  • match_20174_stp17
  • match_20174_stp20
  • match_20174_stp21
  • match_20174_stp22
  • match_20174_stp23
  • match_20174_stp24
  • match_20174_stp25
  • match_20174_stp26
  • match_20174_stp27
  • match_20174_stp29
  • match_20174_stp33
  • match_20174_stp35
  • match_20174_stp36
  • match_20174_stp37
  • match_20174_stp40
  • match_20174_stp41
  • match_20174_stp42
  • match_20174_stp43
  • match_20174_stp44
  • match_20174_stp49
  • combine_stps_covid_20174
  • combine_stps_matches_20174
  • extract_covid_20174_additional
  • extract_20174_additional
  • analysis_20174
  • descriptive_20174
  • cox_esrd_20174
  • cox_egfr_half_20174

Code comparison

Compare the code used in this job request