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Job request: 19125

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
5it2xc3wd7vdapzv

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract_2017_matching
    Status:
    Status: Succeeded
    Job identifier:
    5y3mvypo6je7qr4h
  • Action:
    extract_2020_matching
    Status:
    Status: Failed
    Job identifier:
    e727fql3btm75vo5
    Error:
    nonzero_exit: Job exited with an error: Something went wrong with the database, please contact tech support
  • Action:
    extract_covid_matching
    Status:
    Status: Succeeded
    Job identifier:
    arculruv5zr2sfj4
  • Action:
    clean_covid_matching_2017
    Status:
    Status: Succeeded
    Job identifier:
    squsrtj72vtj2y4i
  • Action:
    clean_covid_matching_2020
    Status:
    Status: Succeeded
    Job identifier:
    4gfzcwbpii7hgd5t
  • Action:
    clean_2017_matching
    Status:
    Status: Succeeded
    Job identifier:
    5eksbfc4gvblew77
  • Action:
    split_stps_2017
    Status:
    Status: Succeeded
    Job identifier:
    r5apskrs2s5s5agi
  • Action:
    match_2017_stp10
    Status:
    Status: Succeeded
    Job identifier:
    o55ker333l3smwl7
  • Action:
    match_2017_stp12
    Status:
    Status: Succeeded
    Job identifier:
    7djksr5w32uot7zn
  • Action:
    match_2017_stp13
    Status:
    Status: Succeeded
    Job identifier:
    xsolkm2vpoqbslcm
  • Action:
    match_2017_stp14
    Status:
    Status: Succeeded
    Job identifier:
    qw3dy6zgzoqbfvvz
  • Action:
    match_2017_stp15
    Status:
    Status: Succeeded
    Job identifier:
    bkxtq2yaac7slswz
  • Action:
    match_2017_stp16
    Status:
    Status: Succeeded
    Job identifier:
    o23xtfwj4ahy7iwx
  • Action:
    match_2017_stp17
    Status:
    Status: Succeeded
    Job identifier:
    gennnpfgicegl7nt
  • Action:
    match_2017_stp20
    Status:
    Status: Succeeded
    Job identifier:
    yz233ffj4fdngqki
  • Action:
    match_2017_stp21
    Status:
    Status: Succeeded
    Job identifier:
    q3eqizi7r4tn7ron
  • Action:
    match_2017_stp22
    Status:
    Status: Succeeded
    Job identifier:
    zy7ubsisuh2a2o3i
  • Action:
    match_2017_stp23
    Status:
    Status: Succeeded
    Job identifier:
    2b63thczsqm3llyx
  • Action:
    match_2017_stp24
    Status:
    Status: Succeeded
    Job identifier:
    vxbvjbksjprha52t
  • Action:
    match_2017_stp25
    Status:
    Status: Succeeded
    Job identifier:
    ojv7q7p72r6j43vb
  • Action:
    match_2017_stp26
    Status:
    Status: Succeeded
    Job identifier:
    j73g3c6stg36qq2u
  • Action:
    match_2017_stp27
    Status:
    Status: Succeeded
    Job identifier:
    nzmizxt5six3ivig
  • Action:
    match_2017_stp29
    Status:
    Status: Succeeded
    Job identifier:
    ndgoevxesl6pkmju
  • Action:
    match_2017_stp33
    Status:
    Status: Succeeded
    Job identifier:
    hh3fhzzii4nvb6g6
  • Action:
    match_2017_stp35
    Status:
    Status: Succeeded
    Job identifier:
    dkp47cdeadjukr5j
  • Action:
    match_2017_stp36
    Status:
    Status: Succeeded
    Job identifier:
    zcafubigk2lzsfpf
  • Action:
    match_2017_stp37
    Status:
    Status: Succeeded
    Job identifier:
    v6xbhgs4o63ijchf
  • Action:
    match_2017_stp40
    Status:
    Status: Succeeded
    Job identifier:
    3xjrpx2z46b2qu62
  • Action:
    match_2017_stp41
    Status:
    Status: Succeeded
    Job identifier:
    r2hfyndbbzs2tym4
  • Action:
    match_2017_stp42
    Status:
    Status: Succeeded
    Job identifier:
    jek3c4nqgt5zuav5
  • Action:
    match_2017_stp43
    Status:
    Status: Succeeded
    Job identifier:
    aswxfhkrtmqm7lvu
  • Action:
    match_2017_stp44
    Status:
    Status: Succeeded
    Job identifier:
    sz6fwnm2imseyaul
  • Action:
    match_2017_stp49
    Status:
    Status: Succeeded
    Job identifier:
    uwuunt7k2rt3liu4
  • Action:
    match_2017_stp5
    Status:
    Status: Succeeded
    Job identifier:
    rbldqx6d7y7begcg
  • Action:
    match_2017_stp6
    Status:
    Status: Succeeded
    Job identifier:
    cpnthdxtmdtsxsf7
  • Action:
    match_2017_stp7
    Status:
    Status: Succeeded
    Job identifier:
    nzjfdksoik7huz2d
  • Action:
    match_2017_stp8
    Status:
    Status: Succeeded
    Job identifier:
    3h77ouxdjjfqjbmq
  • Action:
    match_2017_stp9
    Status:
    Status: Succeeded
    Job identifier:
    2ebpjrj6zn7iradq
  • Action:
    combine_stps_covid_2017
    Status:
    Status: Succeeded
    Job identifier:
    igh4cuxjuzs4yfvi
  • Action:
    combine_stps_matches_2017
    Status:
    Status: Succeeded
    Job identifier:
    twepjypljo2373ex
  • Action:
    match_2020_stp23
    Status:
    Status: Failed
    Job identifier:
    vllgoo2jvf5lkl3j
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp20
    Status:
    Status: Failed
    Job identifier:
    e3z6wfd37ngdyudv
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp5
    Status:
    Status: Failed
    Job identifier:
    e75yh3xnnz63glid
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp6
    Status:
    Status: Failed
    Job identifier:
    qv2wmzrwyubaoamr
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp7
    Status:
    Status: Failed
    Job identifier:
    g4iqrkyg53qs4mlx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp24
    Status:
    Status: Failed
    Job identifier:
    n2bvngnkkp232nrt
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp29
    Status:
    Status: Failed
    Job identifier:
    jyhleq7gburkyere
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp33
    Status:
    Status: Failed
    Job identifier:
    3vi75nbh6b75rocm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp35
    Status:
    Status: Failed
    Job identifier:
    4ea3qr5gwbxexikf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp36
    Status:
    Status: Failed
    Job identifier:
    z2eb2bypk7myjfov
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp17
    Status:
    Status: Failed
    Job identifier:
    xk2ij6elhh5hnutj
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp15
    Status:
    Status: Failed
    Job identifier:
    r466so2g2b7re646
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp41
    Status:
    Status: Failed
    Job identifier:
    piiokt6imnfiqt3e
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp8
    Status:
    Status: Failed
    Job identifier:
    7t3fjoyv3p4hqhrl
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp10
    Status:
    Status: Failed
    Job identifier:
    2b7owiogklr7cqls
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp37
    Status:
    Status: Failed
    Job identifier:
    gy2nzz556umo5jiv
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp40
    Status:
    Status: Failed
    Job identifier:
    2cinp3h6lfflx2jk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp42
    Status:
    Status: Failed
    Job identifier:
    rt2bkv3n5z3c2y4d
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp43
    Status:
    Status: Failed
    Job identifier:
    kqfiiktqykym3nyp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_covid_2020
    Status:
    Status: Failed
    Job identifier:
    kaddv5pn73fbeorw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    split_stps_2020
    Status:
    Status: Failed
    Job identifier:
    4bhumvjjvkwzymat
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp21
    Status:
    Status: Failed
    Job identifier:
    hh574j2pforpokxz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp22
    Status:
    Status: Failed
    Job identifier:
    ftkjwxbdznc6jbtg
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp25
    Status:
    Status: Failed
    Job identifier:
    wwlf5jdoptruhcfi
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp26
    Status:
    Status: Failed
    Job identifier:
    lcerptr2wlwvodop
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp44
    Status:
    Status: Failed
    Job identifier:
    3yuh274x2ywy4er5
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp12
    Status:
    Status: Failed
    Job identifier:
    gwekvu4ktk4h6pi2
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp14
    Status:
    Status: Failed
    Job identifier:
    4l6kvcun7qfguajq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp27
    Status:
    Status: Failed
    Job identifier:
    wu2qvzrfced4sckd
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp49
    Status:
    Status: Failed
    Job identifier:
    n7nmxzptshn23f6e
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp9
    Status:
    Status: Failed
    Job identifier:
    lt2q4nunyek3pjbi
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_matches_2020
    Status:
    Status: Failed
    Job identifier:
    ciyzrwudixxllyre
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp13
    Status:
    Status: Failed
    Job identifier:
    toufhjqoyx2hvz4t
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp16
    Status:
    Status: Failed
    Job identifier:
    km62idrjoybmayqw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    clean_2020_matching
    Status:
    Status: Failed
    Job identifier:
    xmzyvb3h5h5u2gyy
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 50:33:22

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
e1b718c
Requested actions
  • extract_covid_matching
  • clean_covid_matching_2017
  • extract_2017_matching
  • clean_2017_matching
  • split_stps_2017
  • match_2017_stp5
  • match_2017_stp6
  • match_2017_stp7
  • match_2017_stp8
  • match_2017_stp9
  • match_2017_stp10
  • match_2017_stp12
  • match_2017_stp13
  • match_2017_stp14
  • match_2017_stp15
  • match_2017_stp16
  • match_2017_stp17
  • match_2017_stp20
  • match_2017_stp21
  • match_2017_stp22
  • match_2017_stp23
  • match_2017_stp24
  • match_2017_stp25
  • match_2017_stp26
  • match_2017_stp27
  • match_2017_stp29
  • match_2017_stp33
  • match_2017_stp35
  • match_2017_stp36
  • match_2017_stp37
  • match_2017_stp40
  • match_2017_stp41
  • match_2017_stp42
  • match_2017_stp43
  • match_2017_stp44
  • match_2017_stp49
  • combine_stps_covid_2017
  • combine_stps_matches_2017
  • clean_covid_matching_2020
  • extract_2020_matching
  • clean_2020_matching
  • split_stps_2020
  • match_2020_stp5
  • match_2020_stp6
  • match_2020_stp7
  • match_2020_stp8
  • match_2020_stp9
  • match_2020_stp10
  • match_2020_stp12
  • match_2020_stp13
  • match_2020_stp14
  • match_2020_stp15
  • match_2020_stp16
  • match_2020_stp17
  • match_2020_stp20
  • match_2020_stp21
  • match_2020_stp22
  • match_2020_stp23
  • match_2020_stp24
  • match_2020_stp25
  • match_2020_stp26
  • match_2020_stp27
  • match_2020_stp29
  • match_2020_stp33
  • match_2020_stp35
  • match_2020_stp36
  • match_2020_stp37
  • match_2020_stp40
  • match_2020_stp41
  • match_2020_stp42
  • match_2020_stp43
  • match_2020_stp44
  • match_2020_stp49
  • combine_stps_covid_2020
  • combine_stps_matches_2020

Code comparison

Compare the code used in this job request